From 775bbf999dc668592acdbf45735c84a3a121981a Mon Sep 17 00:00:00 2001
From: Bronwen Aken <ba1@sanger.ac.uk>
Date: Mon, 12 Nov 2007 15:58:54 +0000
Subject: [PATCH] Added amino_acid_sub and _rna_edit to help fix Drosophila
 translations

---
 misc-scripts/attribute_types/attrib_type.txt | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/misc-scripts/attribute_types/attrib_type.txt b/misc-scripts/attribute_types/attrib_type.txt
index 1898dbec5f..998cefc2c1 100644
--- a/misc-scripts/attribute_types/attrib_type.txt
+++ b/misc-scripts/attribute_types/attrib_type.txt
@@ -244,3 +244,8 @@
 
 # vega
 143	TotAssemblyLeng	Finished sequence length	Length of the assembly not counting sequence gaps
+
+# Drosophila, only where the translation provided by flybase differs from that in our database by ONE amino acid
+144	amino_acid_sub	Amino acid substitution	In drosophila, some translations have been manually curated by FlyBase and a stop codon has been changed to an amino acid in order to prevent premature truncation.
+# Drosophila. Sometimes sequences have been manually altered to remove one base, and this alters the whole translation
+145	_rna_edit	rna_edit	RNA edit
-- 
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