diff --git a/misc-scripts/xref_mapping/XrefMapper/sus_scrofa.pm b/misc-scripts/xref_mapping/XrefMapper/sus_scrofa.pm index 2509edc59c82cc5521e8074913e7aa102c93771c..33a96582b819258904eaf535b8a4442e201c80ed 100644 --- a/misc-scripts/xref_mapping/XrefMapper/sus_scrofa.pm +++ b/misc-scripts/xref_mapping/XrefMapper/sus_scrofa.pm @@ -94,14 +94,19 @@ SELECT object_xref_id AND priority_description = 'protein_evidence_gt_2' BIGN - $ignore{"EntrezGene/LOC"} =(<<CIGN); + $ignore{"LOC"} =(<<CIGN); SELECT object_xref_id FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id) - WHERE ox_status = 'DUMP_OUT' AND name = 'EntrezGene' - AND label = '%LOC%' + WHERE ox_status = 'DUMP_OUT' AND name in ('Uniprot_genename','EntrezGene') + AND label like 'LOC%' CIGN - + $ignore{"SSC"} =(<<DIGN); +SELECT object_xref_id + FROM object_xref JOIN xref USING(xref_id) JOIN source USING(source_id) + WHERE ox_status = 'DUMP_OUT' AND name in ('Uniprot_genename','miRBase') + AND label like 'SSC%' +DIGN return [\@list,\%ignore]; }