diff --git a/misc-scripts/xref_mapping/XrefParser/RefSeqGPFFParser.pm b/misc-scripts/xref_mapping/XrefParser/RefSeqGPFFParser.pm index b97b3595aa27e06ded824e126ba7c79ae8a63cf7..1aa5722b6500b22d11178278d4b3fa4f0adc1001 100644 --- a/misc-scripts/xref_mapping/XrefParser/RefSeqGPFFParser.pm +++ b/misc-scripts/xref_mapping/XrefParser/RefSeqGPFFParser.pm @@ -169,6 +169,7 @@ sub create_xrefs { $dep{SOURCE_ID} = $dependent_sources{'wormbase_transcript'}; $dep{LINKAGE_SOURCE_ID} = $source_id; $dep{ACCESSION} = $ll; + $dep{LABEL} = $ll; push @{$xref->{DEPENDENT_XREFS}}, \%dep; if($ll =~ /(\S+\.\d+)/){ my $temp = $1; @@ -176,6 +177,7 @@ sub create_xrefs { $dep2{SOURCE_ID} = $dependent_sources{'wormbase_gene'}; $dep2{LINKAGE_SOURCE_ID} = $source_id; $dep2{ACCESSION} = $temp; + $dep2{LABEL} = $temp; push @{$xref->{DEPENDENT_XREFS}}, \%dep2; } } diff --git a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm index 0cbbf6cdb191f222c4479478b4cd06aa556fbe1a..e296e33b5a0aa0b5b2b0a1e9df0aab8b22280f21 100644 --- a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm +++ b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm @@ -252,6 +252,7 @@ sub create_xrefs { $dep{LINKAGE_SOURCE_ID} = $xref->{SOURCE_ID}; $dep{SOURCE_ID} = $dependent_sources{'wormbase_transcript'}; $dep{ACCESSION} = $acc; + $dep{LABEL} = $acc; push @{$xref->{DEPENDENT_XREFS}}, \%dep; # array of hashrefs my $gene; @@ -262,6 +263,7 @@ sub create_xrefs { $dep2{LINKAGE_SOURCE_ID} = $xref->{SOURCE_ID}; $dep2{SOURCE_ID} = $dependent_sources{'wormbase_gene'}; $dep2{ACCESSION} = $gene; + $dep2{LABEL} = $gene; push @{$xref->{DEPENDENT_XREFS}}, \%dep2; # array of hashrefs } @@ -274,6 +276,7 @@ sub create_xrefs { $dep3{LINKAGE_SOURCE_ID} = $xref->{SOURCE_ID}; $dep3{SOURCE_ID} = $dependent_sources{'wormpep_id'}; $dep3{ACCESSION} = $worm_id; + $dep3{LABEL} = $worm_id; push @{$xref->{DEPENDENT_XREFS}}, \%dep3; # array of hashrefs # print $worm_id."\t".$gene."\t".$acc."\n";