diff --git a/misc-scripts/xref_mapping/xref_config.ini b/misc-scripts/xref_mapping/xref_config.ini index 2d5d2b373c2861f34105bd7ec0bcb696b2237ded..e8fbeed63bf264a96a4438047232f15cafe4f766 100644 --- a/misc-scripts/xref_mapping/xref_config.ini +++ b/misc-scripts/xref_mapping/xref_config.ini @@ -1323,19 +1323,6 @@ parser = RefSeqGPFFParser release_uri = ftp://ftp.ncbi.nih.gov/refseq/release/release-notes/RefSeq-release*.txt data_uri = ftp://ftp.ncbi.nih.gov/refseq/release/plant/plant*.protein.gpff.gz - -[source RefSeq_peptide::MULTI-complete] -# Used by phaeodactylum_tricornutum -name = RefSeq_peptide -download = Y -order = 30 -priority = 2 -prio_descr = -parser = RefSeqGPFFParser -release_uri = ftp://ftp.ncbi.nih.gov/refseq/release/release-notes/RefSeq-release*.txt -data_uri = ftp://ftp.ncbi.nih.gov/refseq/release/complete/complete*.protein.gpff.gz - - [source RefSeq_peptide::MULTI-protozoa] # Used by dictyostelium_discoideum name = RefSeq_peptide @@ -2700,71 +2687,6 @@ data_uri = ftp://ftp.geneontology.org/pub/go/gene-associations/gene_assoc # # ######################################################################## -[species aedes_aegypti] -taxonomy_id = 7159 -aliases = aaegypti, aedes, aedesaegypti -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::EG - -[species acyrthosiphon_pisum] -taxonomy_id = 7029 -aliases = apisum, acyrthosiphon, acyrthosiphonpisum, pea aphid -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = ArrayExpress::EG - -[species anopheles_darlingi] -taxonomy_id = 43151 -aliases = adarlingi, anophelesdarlingi, American malaria mosquito -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species anopheles_gambiae] -taxonomy_id = 7165 -taxonomy_id = 180454 -aliases = agambiae, anopheles, anophelesgambiae, mosquito -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = RefSeq_mRNA_predicted::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::EG - -[species apis_mellifera] -taxonomy_id = 7460 -aliases = amellifera, apismellifera, honeybee -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = RefSeq_dna::apis_mellifera -source = RefSeq_peptide::apis_mellifera -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = ncRNA_EG::EG - [species aspergillus_clavatus] taxonomy_id = 5057 taxonomy_id = 344612 @@ -3147,16 +3069,6 @@ source = RFAM::MULTI source = miRBase::MULTI source = ArrayExpress::MULTI -[species culex_quinquefasciatus] -taxonomy_id = 7176 -aliases = cpipiens, culex, culexpipiens, culex quinquefasciatus, cquinquefasciatus, culexquinquefasciatus -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::EG - [species danio_rerio] taxonomy_id = 7955 aliases = danio, daniorerio, drerio, zebrafish @@ -3184,186 +3096,63 @@ source = ArrayExpress::EG [species drosophila_melanogaster] taxonomy_id = 7227 aliases = dmelanogaster, drosophila, drosophilamelanogaster -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::drosophila_melanogaster -source = RefSeq_peptide::drosophila_melanogaster -source = GO::drosophila_melanogaster -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_melanogaster [species drosophila_pseudoobscura] taxonomy_id = 46245 aliases = dpseudoobscura, drosophila, drosophilapseudoobscura -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_pseudoobscura [species drosophila_ananassae] taxonomy_id = 7217 aliases = dananassae, drosophila, drosophilaananassae -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_ananassae [species drosophila_erecta] taxonomy_id = 7220 aliases = derecta, drosophila, drosophilaerecta -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_erecta [species drosophila_grimshawi] taxonomy_id = 7222 aliases = dgrimshawi, drosophila, drosophilagrimshawi -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_grimshawi [species drosophila_mojavensis] taxonomy_id = 7230 aliases = dmojavensis, drosophila, drosophilamojavensis -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_mojavensis [species drosophila_persimilis] taxonomy_id = 7234 aliases = dpersimilis, drosophila, drosophilapersimilis -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_persimilis [species drosophila_sechellia] taxonomy_id = 7238 aliases = dsechellia, drosophila, drosophilasechellia -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_sechellia [species drosophila_simulans] taxonomy_id = 7240 aliases = dsimulans, drosophila, drosophilasimulans -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_simulans [species drosophila_virilis] taxonomy_id = 7244 aliases = dvirilis, drosophila, drosophilavirilis -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_virilis [species drosophila_willistoni] taxonomy_id = 7260 aliases = dwillistoni, drosophila, drosophilawillistoni -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_willistoni [species drosophila_yakuba] taxonomy_id = 7245 aliases = dyakuba, drosophila, drosophilayakuba -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = GO::MULTI -source = goslim_goa::EG -source = ArrayExpress::EG source = flybase_gene_id::drosophila_yakuba - -[species daphnia_pulex] -taxonomy_id = 6669 -aliases = daphniapulex, dpulex, common water flea -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - [species equus_caballus] taxonomy_id = 9796 aliases = horse @@ -3396,16 +3185,6 @@ source = RFAM::MULTI source = miRBase::MULTI source = ArrayExpress::MULTI -[species ixodes_scapularis] -taxonomy_id = 6945 -aliases = ixodes, ixodesscapularis, ixodes scapularis -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::EG - [species mus_musculus] taxonomy_id = 10090 aliases = mmusculus, mouse, musmusculus @@ -3421,16 +3200,6 @@ taxonomy_id = 9598 aliases = pantroglodytes, ptroglodytes, chimpanzee, chimp source = VGNC::pan_troglodytes -[species pediculus_humanus] -taxonomy_id = 121225 -aliases = pediculushumanus, pediculus, phumanus -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::MULTI - [species rattus_norvegicus] taxonomy_id = 10116 aliases = rat, rattusnorvegicus, rnorvegicus @@ -4275,88 +4044,6 @@ source = Uniprot/SPTREMBL::MULTI source = Uniprot/SWISSPROT::MULTI source = Gramene_Pathway::zea_mays -[species amphimedon_queenslandica] -taxonomy_id = 400682 -aliases = sponge, aqueenslandica, amphimedon_queenslandica -source = EntrezGene::MULTI -source = goslim_goa::EG -source = GO::MULTI -source = RefSeq_dna::amphimedon_queenslandica -source = RefSeq_peptide::amphimedon_queenslandica -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::EG - -[species atta_cephalotes] -taxonomy_id = 12957 -aliases = acephalotes, atta_cephalotes, Atta cephalotes -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species bombyx_mori] -taxonomy_id = 7091 -aliases = silkworm, silk moth, bmori, Bombyx mori -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species nematostella_vectensis] -taxonomy_id = 45351 -aliases = anemone, sea anemone, nvectensis, nematostella_vectensis -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species strongylocentrotus_purpuratus] -taxonomy_id = 7668 -aliases = sea urchin, spurpuratus, strongylocentrotus_purpuratus -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = RefSeq_dna::strongylocentrotus_purpuratus -source = RefSeq_peptide::strongylocentrotus_purpuratus -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = misc_EG::EG -source = ncRNA_EG::EG - -[species tribolium_castaneum] -taxonomy_id = 7070 -aliases = red flour beetle, tcastaneum, tribolium_castaneum -source = EntrezGene::MULTI -source = goslim_goa::EG -source = GO::MULTI -source = RefSeq_dna::tribolium_castaneum -source = RefSeq_peptide::tribolium_castaneum -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = ArrayExpress::EG - [species gaeumannomyces_graminis] taxonomy_id = 644352 aliases = ggraminis, gaeumannomyces_graminis, gaeumannomyces graminis, gaeumannomyces graminis var. tritici R3-111a-1 @@ -4371,329 +4058,71 @@ source = PHIbase::MULTI source = BROAD_Magnaporthe_DB::MULTI source = ArrayExpress::EG -[species trichinella_spiralis] -taxonomy_id = 6334 -aliases = trichinella_spiralis -source = GO::MULTI -source = goslim_goa::EG -source = RefSeq_dna::MULTI-complete -source = RefSeq_peptide::MULTI-complete -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = ArrayExpress::EG - -[species nasonia_vitripennis] -taxonomy_id = 7425 -aliases = nasoniavitripennis, nvitripennis, Nasonia vitripennis, jewel wasp +[species metazoa] +taxonomy_id = 33208 source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG source = RefSeq_dna::MULTI-invertebrate source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species danaus_plexippus] -taxonomy_id = 13037 -aliases = dplexippus, danaus plexippus, monarch butterfly -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI +source = Uniprot/SPTREMBL::MULTI-invertebrate +source = Uniprot/SWISSPROT::MULTI-invertebrate source = UniParc::MULTI -source = GO::MULTI -source = goslim_goa::EG source = ArrayExpress::EG - -[species heliconius_melpomene] -taxonomy_id = 34740 -aliases = hmelpomene, heliconius melpomene, postman butterfly -source = EntrezGene::MULTI -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = GO::MULTI +source = ncRNA_EG::EG source = goslim_goa::EG -source = ArrayExpress::EG - -[species strigamia_maritima] -taxonomy_id = 126957 -aliases = strigamiamaritima, smaritima, Strigamia maritima -source = EntrezGene::MULTI source = GO::MULTI -source = goslim_goa::EG -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RFAM::EG -source = miRBase::MULTI +source = Interpro::CORE source = RNAMMER::MULTI -source = TRNASCAN_SE::MULTI -source = ArrayExpress::EG - -[species megaselia_scalaris] -taxonomy_id = 36166 -aliases = megaseliascalaris, mscalaris, Megaselia scalaris -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI -source = RFAM::EG source = miRBase::MULTI -source = RNAMMER::MULTI +source = RFAM::EG source = TRNASCAN_SE::MULTI -source = ArrayExpress::EG - -[species capitella_teleta] -taxonomy_id = 283909 -aliases = capitellateleta, cteleta, Capitella teleta -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species crassostrea_gigas] -taxonomy_id = 29159 -aliases = crassostreagigas, cgigas, Crassostrea gigas -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species helobdella_robusta] -taxonomy_id = 6412 -aliases = helobdellarobusta, hrobusta, Helobdella robusta -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species lottia_gigantea] -taxonomy_id = 225164 -aliases = lottiagigantea, lgigantea, Lottia gigantea -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species rhodnius_prolixus] -taxonomy_id = 13249 -aliases = rhodniusprolixus, rprolixus, Rhodnius prolixus -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species tetranychus_urticae] -taxonomy_id = 32264 -aliases = tetranychusurticae, turticae, Tetranychus urticae -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species dendroctonus_ponderosae] -taxonomy_id = 77166 -aliases = dendroctonusponderosae, dponderosae, Dendroctonus ponderosae -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species solenopsis_invicta] -taxonomy_id = 13686 -aliases = solenopsisinvicta, sinvicta, Solenopsis invicta -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species mnemiopsis_leidyi] -taxonomy_id = 27923 -aliases = mnemiopsis leidyi, mleidyi, warty comb jelly, sea walnut -source = EntrezGene::MULTI -source = GO::MULTI -source = goslim_goa::EG -source = Interpro::CORE -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI - -[species melitaea_cinxia] -taxonomy_id = 113334 -aliases = Glanville fritillary, melitaeacinxia, mcinxia, Melitaea cinxia -source = EntrezGene::MULTI -source = ncRNA_EG::EG -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI -source = Uniprot/SWISSPROT::MULTI -source = UniParc::MULTI +source = misc_EG::EG [species caenorhabditis_elegans] taxonomy_id = 6239 aliases = caenorhabditiselegans, celegans, elegans -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::celegans -source = ArrayExpress::EG [species caenorhabditis_briggsae] taxonomy_id = 6238 aliases = caenorhabditis_briggae_prjna10731 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::cbriggsae [species caenorhabditis_remanei] taxonomy_id = 31234 aliases = caenorhabditis_remanei_prjna53967 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::cremanei [species caenorhabditis_brenneri] taxonomy_id = 135651 aliases = caenorhabditis_brenneri_prjna20035 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::cbrenneri [species caenorhabditis_japonica] taxonomy_id = 281687 aliases = caenorhabditis_japonica_prjna12591 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::cjaponica [species brugia_malayi] taxonomy_id = 6279 aliases = brugia_malayi_prjna10729 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::bmalayi [species onchocerca_volvulus] taxonomy_id = 6282 aliases = onchocerca_volvulus_prjeb513 -source = EntrezGene::MULTI -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::ovolvulus [species pristionchus_pacificus] taxonomy_id = 54126 aliases = pristionchus_pacificus_prjna12644 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::ppacificus [species strongyloides_ratti] taxonomy_id = 34506 aliases = strongyloides_ratti_prjeb125 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::sratti - [species trichuris_muris] taxonomy_id = 70415 aliases = trichuris_muris_prjeb126 -source = EntrezGene::MULTI -source = RefSeq_dna::MULTI-invertebrate -source = RefSeq_peptide::MULTI-invertebrate -source = Uniprot/SPTREMBL::MULTI-invertebrate -source = Uniprot/SWISSPROT::MULTI-invertebrate -source = UniParc::MULTI source = wormbase::tmuris