diff --git a/modules/t/test-genome-DBs/circ/core/meta.txt b/modules/t/test-genome-DBs/circ/core/meta.txt
index b9bbe3af63eaedb32c1d258d5750b0c20b8dfd93..75fdfdba825e07d99af9db5dbd4e8d7b3a5319c9 100644
--- a/modules/t/test-genome-DBs/circ/core/meta.txt
+++ b/modules/t/test-genome-DBs/circ/core/meta.txt
@@ -99,3 +99,4 @@
 99	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 100	\N	patch	patch_85_86_a.sql|schema_version
 101	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+102	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
index d79acb9bb859176e1b2e7a13f193344d737191a5..1239bcf547faffbfd51947ebd28874c21ddcee59 100644
--- a/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
+++ b/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt
@@ -78,3 +78,4 @@
 138	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 146	\N	patch	patch_85_86_a.sql|schema_version
 147	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+148	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt
index 6636979ef44962fb8a982ae407314d0b399576dd..d78d63cb162f549c64bf663e97d1141b4616e403 100644
--- a/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt
+++ b/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt
@@ -78,3 +78,4 @@
 127	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 128	\N	patch	patch_85_86_a.sql|schema_version
 129	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+130	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt
index ec9902129d72be384a79f52d6123729a4ce0d169..0dc79836e013c129d8fa41cd20be40103b725c11 100644
--- a/modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt
+++ b/modules/t/test-genome-DBs/homo_sapiens/patch/meta.txt
@@ -83,3 +83,4 @@
 2090	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 2091	\N	patch	patch_85_86_a.sql|schema_version
 2092	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+2093	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/mapping/core/meta.txt b/modules/t/test-genome-DBs/mapping/core/meta.txt
index f35208f8de3cda0818fe31c9b9262d0d27234eeb..39c500efb466c58ae8f9886e520ec0902af8fa84 100644
--- a/modules/t/test-genome-DBs/mapping/core/meta.txt
+++ b/modules/t/test-genome-DBs/mapping/core/meta.txt
@@ -39,3 +39,4 @@
 132	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 133	\N	patch	patch_85_86_a.sql|schema_version
 134	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+135	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/multi/compara/gene_member.txt b/modules/t/test-genome-DBs/multi/compara/gene_member.txt
index 818c39896c11d49b4c21f804c3ea2059eaa9a249..7dcb5f58e7a4a833d873287484ab3aadd7ee52d9 100644
--- a/modules/t/test-genome-DBs/multi/compara/gene_member.txt
+++ b/modules/t/test-genome-DBs/multi/compara/gene_member.txt
@@ -1,49 +1,49 @@
-100000065	ENSTNIG00000020505	0	ENSEMBLGENE	99883	65	100000065	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4514314	3306094	3306168	1	SNORD2	0	1	1	57	2	0
-100002261	ENSTRUG00000019469	0	ENSEMBLGENE	31033	4	100002260	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	36722	268619	268692	1	SNORD2	0	1	1	58	1	0
-100002264	ENSTRUG00000019394	0	ENSEMBLGENE	31033	4	100002264	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	36722	269022	269095	1	SNORD2	0	1	1	48	1	0
-100003686	ENSTNIG00000020529	0	ENSEMBLGENE	99883	65	100003686	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4514338	52669397	52669470	-1	SNORD2	0	1	1	48	2	0
-100003687	ENSTNIG00000020519	0	ENSEMBLGENE	99883	65	100003688	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4514338	52669729	52669803	-1	SNORD2	0	1	1	57	2	0
-100008184	ENSGACG00000022790	0	ENSEMBLGENE	69293	36	100008184	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039125	9224992	9225064	1	SNORD2	0	1	1	58	1	0
-100008186	ENSGACG00000022791	0	ENSEMBLGENE	69293	36	100008186	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039125	9225550	9225621	1	SNORD2	0	1	1	48	1	0
-100009977	ENSPPYG00000028034	0	ENSEMBLGENE	9601	60	100009977	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4346076	190574508	190574576	1	SNORD2	0	1	1	45	1	0
-100016849	ENSORLG00000021574	0	ENSEMBLGENE	8090	37	100016849	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039164	14653720	14653794	1	SNORD2	0	1	1	58	1	0
-100016850	ENSORLG00000021634	0	ENSEMBLGENE	8090	37	100016850	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039164	14654245	14654320	1	SNORD2	0	1	1	48	1	0
-100029371	ENSMMUG00000036232	0	ENSEMBLGENE	9544	31	100029371	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	1045569	164954481	164954549	1	SNORD2	0	1	1	33	3	0
-100033919	ENSMMUG00000037192	0	ENSEMBLGENE	9544	31	100033919	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	1045563	179142348	179142416	1	SNORD2	0	1	1	44	3	0
-100046335	ENSTGUG00000018017	0	ENSEMBLGENE	59729	87	100046335	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	12160504	18582628	18582698	1	SNORD2	0	1	1	58	0	0
-100047101	ENSOANG00000027382	0	ENSEMBLGENE	9258	43	100047100	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2175916	513	593	-1	SNORD2	0	1	1	58	0	0
-100054945	ENSXETG00000029617	0	ENSEMBLGENE	8364	116	100054945	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13094385	381059	381128	-1	SNORD2	0	1	1	49	1	0
-100054946	ENSXETG00000029793	0	ENSEMBLGENE	8364	116	100054946	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13094385	385005	385076	-1	SNORD2	0	1	1	58	1	0
-100065013	ENSBTAG00000044311	0	ENSEMBLGENE	9913	122	100065013	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13200476	81062767	81062835	-1	SNORD2	0	1	1	47	0	0
-100071636	ENSGGOG00000032407	0	ENSEMBLGENE	9595	123	100071636	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13203820	188240400	188240468	1	SNORD2	0	1	1	45	1	0
-100087720	ENSOCUG00000023265	0	ENSEMBLGENE	9986	108	100088181	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	12966556	78843854	78843921	-1	SNORD2	0	1	1	45	2	0
-100093454	ENSACAG00000018292	0	ENSEMBLGENE	28377	111	100094079	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13049389	118621	118692	-1	SNORD2	0	1	1	58	0	0
-100099604	ENSMUSG00000088524	0	ENSEMBLGENE	10090	134	100100368	small nucleolar RNA, C/D box 2 [Source:MGI Symbol;Acc:MGI:3819528]	13705560	23108953	23109021	1	Snord2	0	1	1	45	0	0
-100099742	ENSLACG00000021456	0	ENSEMBLGENE	7897	129	100100505	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13636391	2411690	2411759	1	SNORD2	0	1	1	49	0	0
-100113582	ENSPTRG00000037854	0	ENSEMBLGENE	9598	125	100114678	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13211504	190852362	190852430	1	SNORD2	0	1	1	45	1	0
-100123418	ENSAPLG00000000068	0	ENSEMBLGENE	8839	144	100124975	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13785441	276440	276510	1	SNORD2	0	1	1	58	0	0
-100130549	ENSGALG00000025617	0	ENSEMBLGENE	9031	142	100132105	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13783415	15672950	15673019	1	SNORD2	0	1	1	58	0	0
-100137301	ENSONIG00000022215	0	ENSEMBLGENE	8128	130	100138857	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13688462	12140155	12140229	1	SNORD2	0	1	1	58	1	0
-100137304	ENSONIG00000022099	0	ENSEMBLGENE	8128	130	100138860	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13688462	12140712	12140786	1	SNORD2	0	1	1	48	1	0
-100151878	ENSMGAG00000000091	0	ENSEMBLGENE	9103	112	100153475	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13055709	16212140	16212209	1	SNORD2	0	1	1	58	0	0
-100162160	ENSCAFG00000027814	0	ENSEMBLGENE	9615	135	100164038	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13705633	19356118	19356186	1	SNORD2	0	1	1	45	5	0
-100164895	ENSMEUG00000017324	0	ENSEMBLGENE	9315	91	100166821	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	12753243	17043	17112	1	SNORD2	0	1	1	58	0	0
-100176264	ENSG00000238707	0	ENSEMBLGENE	9606	150	100178494	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13955520	56595963	56596031	-1	SNORD2	0	1	1	45	1	0
-100182621	ENSFALG00000015549	0	ENSEMBLGENE	59894	145	100185036	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13862672	11103001	11103071	1	SNORD2	0	1	1	58	0	0
-100184508	ENSCSAG00000026646	0	ENSEMBLGENE	60711	153	100186963	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14022783	81076307	81076375	1	SNORD2	0	1	1	44	2	0
-100191757	ENSOGAG00000023959	0	ENSEMBLGENE	30611	124	100194492	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13203897	9863584	9863651	-1	SNORD2	0	1	1	45	0	0
-100204308	ENSPANG00000010082	0	ENSEMBLGENE	9555	151	100207705	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13955574	157844257	157844325	1	SNORD2	0	1	1	45	1	0
-100215815	ENSDARG00000082639	0	ENSEMBLGENE	7955	154	100220003	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026375	7922554	7922624	1	SNORD2	0	1	1	48	2	0
-100215819	ENSDARG00000083056	0	ENSEMBLGENE	7955	154	100220007	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026375	7922934	7923004	1	SNORD2	0	1	1	42	2	0
-100215833	ENSDARG00000080523	0	ENSEMBLGENE	7955	154	100220025	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026375	7925865	7925936	1	SNORD2	0	1	1	58	2	0
-100220485	ENSCSAG00000027032	0	ENSEMBLGENE	60711	153	100225049	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14022801	79602435	79602503	1	SNORD2	0	1	1	33	2	0
-100223263	ENSLOCG00000019102	0	ENSEMBLGENE	7918	148	100227949	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13902789	461949	462018	1	SNORD2	0	1	1	58	0	0
-100226195	ENSOARG00000022667	0	ENSEMBLGENE	9940	147	100231022	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13902799	198671751	198671819	-1	SNORD2	0	1	1	47	1	0
-100235573	ENSMODG00000026826	0	ENSEMBLGENE	13616	46	100240803	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	3570454	206772418	206772486	-1	SNORD2	0	1	1	58	0	0
-100238959	ENSPFOG00000021602	0	ENSEMBLGENE	48698	152	100244296	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14018859	380507	380583	1	SNORD2	0	1	1	58	1	0
-100238967	ENSPFOG00000021430	0	ENSEMBLGENE	48698	152	100244304	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14018859	381062	381137	1	SNORD2	0	1	1	48	1	0
-100242730	ENSSSCG00000018746	0	ENSEMBLGENE	9823	132	100248134	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13701661	133974703	133974771	1	SNORD2	0	1	1	45	2	0
-100246488	ENSECAG00000027514	0	ENSEMBLGENE	9796	61	100252028	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4346125	24791922	24791988	1	SNORD2	0	1	1	45	1	0
-100263700	ENSRNOG00000053621	0	ENSEMBLGENE	10116	155	100270056	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026979	81378396	81378464	-1	SNORD2	0	1	1	45	0	0
-100277999	ENSG00000174852	0	ENSEMBLGENE	9606	150	100285954	small nucleolar RNA, C/D box 2 [Source:HGNC Symbol;Acc:HGNC:32678]	13955539	186784796	186784864	1	SNORD2	0	1	1	45	1	0
-100281324	ENSTSYG00000021671	0	ENSEMBLGENE	9478	82	100289437	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	11302777	17893	17961	1	SNORD2	0	1	1	45	0	0
+100000065	ENSTNIG00000020505	0	ENSEMBLGENE	99883	65	100000065	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4514314	3306094	3306168	1	SNORD2
+100002261	ENSTRUG00000019469	0	ENSEMBLGENE	31033	4	100002260	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	36722	268619	268692	1	SNORD2
+100002264	ENSTRUG00000019394	0	ENSEMBLGENE	31033	4	100002264	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	36722	269022	269095	1	SNORD2
+100003686	ENSTNIG00000020529	0	ENSEMBLGENE	99883	65	100003686	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4514338	52669397	52669470	-1	SNORD2
+100003687	ENSTNIG00000020519	0	ENSEMBLGENE	99883	65	100003688	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4514338	52669729	52669803	-1	SNORD2
+100008184	ENSGACG00000022790	0	ENSEMBLGENE	69293	36	100008184	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039125	9224992	9225064	1	SNORD2
+100008186	ENSGACG00000022791	0	ENSEMBLGENE	69293	36	100008186	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039125	9225550	9225621	1	SNORD2
+100009977	ENSPPYG00000028034	0	ENSEMBLGENE	9601	60	100009977	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4346076	190574508	190574576	1	SNORD2
+100016849	ENSORLG00000021574	0	ENSEMBLGENE	8090	37	100016849	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039164	14653720	14653794	1	SNORD2
+100016850	ENSORLG00000021634	0	ENSEMBLGENE	8090	37	100016850	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2039164	14654245	14654320	1	SNORD2
+100029371	ENSMMUG00000036232	0	ENSEMBLGENE	9544	31	100029371	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	1045569	164954481	164954549	1	SNORD2
+100033919	ENSMMUG00000037192	0	ENSEMBLGENE	9544	31	100033919	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	1045563	179142348	179142416	1	SNORD2
+100046335	ENSTGUG00000018017	0	ENSEMBLGENE	59729	87	100046335	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	12160504	18582628	18582698	1	SNORD2
+100047101	ENSOANG00000027382	0	ENSEMBLGENE	9258	43	100047100	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	2175916	513	593	-1	SNORD2
+100054945	ENSXETG00000029617	0	ENSEMBLGENE	8364	116	100054945	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13094385	381059	381128	-1	SNORD2
+100054946	ENSXETG00000029793	0	ENSEMBLGENE	8364	116	100054946	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13094385	385005	385076	-1	SNORD2
+100065013	ENSBTAG00000044311	0	ENSEMBLGENE	9913	122	100065013	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13200476	81062767	81062835	-1	SNORD2
+100071636	ENSGGOG00000032407	0	ENSEMBLGENE	9595	123	100071636	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13203820	188240400	188240468	1	SNORD2
+100087720	ENSOCUG00000023265	0	ENSEMBLGENE	9986	108	100088181	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	12966556	78843854	78843921	-1	SNORD2
+100093454	ENSACAG00000018292	0	ENSEMBLGENE	28377	111	100094079	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13049389	118621	118692	-1	SNORD2
+100099604	ENSMUSG00000088524	0	ENSEMBLGENE	10090	134	100100368	small nucleolar RNA, C/D box 2 [Source:MGI Symbol;Acc:MGI:3819528]	13705560	23108953	23109021	1	Snord2
+100099742	ENSLACG00000021456	0	ENSEMBLGENE	7897	129	100100505	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13636391	2411690	2411759	1	SNORD2
+100113582	ENSPTRG00000037854	0	ENSEMBLGENE	9598	125	100114678	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13211504	190852362	190852430	1	SNORD2
+100123418	ENSAPLG00000000068	0	ENSEMBLGENE	8839	144	100124975	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13785441	276440	276510	1	SNORD2
+100130549	ENSGALG00000025617	0	ENSEMBLGENE	9031	142	100132105	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13783415	15672950	15673019	1	SNORD2
+100137301	ENSONIG00000022215	0	ENSEMBLGENE	8128	130	100138857	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13688462	12140155	12140229	1	SNORD2
+100137304	ENSONIG00000022099	0	ENSEMBLGENE	8128	130	100138860	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13688462	12140712	12140786	1	SNORD2
+100151878	ENSMGAG00000000091	0	ENSEMBLGENE	9103	112	100153475	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13055709	16212140	16212209	1	SNORD2
+100162160	ENSCAFG00000027814	0	ENSEMBLGENE	9615	135	100164038	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13705633	19356118	19356186	1	SNORD2
+100164895	ENSMEUG00000017324	0	ENSEMBLGENE	9315	91	100166821	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	12753243	17043	17112	1	SNORD2
+100176264	ENSG00000238707	0	ENSEMBLGENE	9606	150	100178494	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13955520	56595963	56596031	-1	SNORD2
+100182621	ENSFALG00000015549	0	ENSEMBLGENE	59894	145	100185036	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13862672	11103001	11103071	1	SNORD2
+100184508	ENSCSAG00000026646	0	ENSEMBLGENE	60711	153	100186963	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14022783	81076307	81076375	1	SNORD2
+100191757	ENSOGAG00000023959	0	ENSEMBLGENE	30611	124	100194492	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13203897	9863584	9863651	-1	SNORD2
+100204308	ENSPANG00000010082	0	ENSEMBLGENE	9555	151	100207705	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13955574	157844257	157844325	1	SNORD2
+100215815	ENSDARG00000082639	0	ENSEMBLGENE	7955	154	100220003	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026375	7922554	7922624	1	SNORD2
+100215819	ENSDARG00000083056	0	ENSEMBLGENE	7955	154	100220007	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026375	7922934	7923004	1	SNORD2
+100215833	ENSDARG00000080523	0	ENSEMBLGENE	7955	154	100220025	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026375	7925865	7925936	1	SNORD2
+100220485	ENSCSAG00000027032	0	ENSEMBLGENE	60711	153	100225049	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14022801	79602435	79602503	1	SNORD2
+100223263	ENSLOCG00000019102	0	ENSEMBLGENE	7918	148	100227949	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13902789	461949	462018	1	SNORD2
+100226195	ENSOARG00000022667	0	ENSEMBLGENE	9940	147	100231022	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13902799	198671751	198671819	-1	SNORD2
+100235573	ENSMODG00000026826	0	ENSEMBLGENE	13616	46	100240803	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	3570454	206772418	206772486	-1	SNORD2
+100238959	ENSPFOG00000021602	0	ENSEMBLGENE	48698	152	100244296	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14018859	380507	380583	1	SNORD2
+100238967	ENSPFOG00000021430	0	ENSEMBLGENE	48698	152	100244304	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14018859	381062	381137	1	SNORD2
+100242730	ENSSSCG00000018746	0	ENSEMBLGENE	9823	132	100248134	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	13701661	133974703	133974771	1	SNORD2
+100246488	ENSECAG00000027514	0	ENSEMBLGENE	9796	61	100252028	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	4346125	24791922	24791988	1	SNORD2
+100263700	ENSRNOG00000053621	0	ENSEMBLGENE	10116	155	100270056	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	14026979	81378396	81378464	-1	SNORD2
+100277999	ENSG00000174852	0	ENSEMBLGENE	9606	150	100285954	small nucleolar RNA, C/D box 2 [Source:HGNC Symbol;Acc:HGNC:32678]	13955539	186784796	186784864	1	SNORD2
+100281324	ENSTSYG00000021671	0	ENSEMBLGENE	9478	82	100289437	Small nucleolar RNA SNORD2 [Source:RFAM;Acc:RF01299]	11302777	17893	17961	1	SNORD2
diff --git a/modules/t/test-genome-DBs/multi/compara/gene_member_hom_stats.txt b/modules/t/test-genome-DBs/multi/compara/gene_member_hom_stats.txt
new file mode 100644
index 0000000000000000000000000000000000000000..f5fcf259e4fda70e884e4584cba1ec594f1dcbfd
--- /dev/null
+++ b/modules/t/test-genome-DBs/multi/compara/gene_member_hom_stats.txt
@@ -0,0 +1,49 @@
+100000065	default	0	1	1	57	2	0
+100002261	default	0	1	1	58	1	0
+100002264	default	0	1	1	48	1	0
+100003686	default	0	1	1	48	2	0
+100003687	default	0	1	1	57	2	0
+100008184	default	0	1	1	58	1	0
+100008186	default	0	1	1	48	1	0
+100009977	default	0	1	1	45	1	0
+100016849	default	0	1	1	58	1	0
+100016850	default	0	1	1	48	1	0
+100029371	default	0	1	1	33	3	0
+100033919	default	0	1	1	44	3	0
+100046335	default	0	1	1	58	0	0
+100047101	default	0	1	1	58	0	0
+100054945	default	0	1	1	49	1	0
+100054946	default	0	1	1	58	1	0
+100065013	default	0	1	1	47	0	0
+100071636	default	0	1	1	45	1	0
+100087720	default	0	1	1	45	2	0
+100093454	default	0	1	1	58	0	0
+100099604	default	0	1	1	45	0	0
+100099742	default	0	1	1	49	0	0
+100113582	default	0	1	1	45	1	0
+100123418	default	0	1	1	58	0	0
+100130549	default	0	1	1	58	0	0
+100137301	default	0	1	1	58	1	0
+100137304	default	0	1	1	48	1	0
+100151878	default	0	1	1	58	0	0
+100162160	default	0	1	1	45	5	0
+100164895	default	0	1	1	58	0	0
+100176264	default	0	1	1	45	1	0
+100182621	default	0	1	1	58	0	0
+100184508	default	0	1	1	44	2	0
+100191757	default	0	1	1	45	0	0
+100204308	default	0	1	1	45	1	0
+100215815	default	0	1	1	48	2	0
+100215819	default	0	1	1	42	2	0
+100215833	default	0	1	1	58	2	0
+100220485	default	0	1	1	33	2	0
+100223263	default	0	1	1	58	0	0
+100226195	default	0	1	1	47	1	0
+100235573	default	0	1	1	58	0	0
+100238959	default	0	1	1	58	1	0
+100238967	default	0	1	1	48	1	0
+100242730	default	0	1	1	45	2	0
+100246488	default	0	1	1	45	1	0
+100263700	default	0	1	1	45	0	0
+100277999	default	0	1	1	45	1	0
+100281324	default	0	1	1	45	0	0
diff --git a/modules/t/test-genome-DBs/multi/compara/homology.txt b/modules/t/test-genome-DBs/multi/compara/homology.txt
index 6a7e6ed6b95046f190d0647c47752ef0ce068acb..ee9b449858ec9dd4c6a3ab3f3b84dda8f10a54e1 100644
--- a/modules/t/test-genome-DBs/multi/compara/homology.txt
+++ b/modules/t/test-genome-DBs/multi/compara/homology.txt
@@ -1,65 +1,65 @@
-100971935	50908	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462673	100184217	\N	100.00
-100971951	50958	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462672	100184217	\N	100.00
-100971983	50884	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462671	100184217	\N	100.00
-100972047	51020	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462670	100184217	\N	100.00
-100972055	50961	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462670	100184217	\N	100.00
-100972095	50920	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462669	100184217	\N	100.00
-100972259	100019	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	100.00
-100972309	50950	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	\N
-100972409	50914	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	\N
-100972489	50976	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	100.00
-100972657	50981	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462667	100184217	\N	100.00
-100972799	50974	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462666	100184217	\N	100.00
-100973398	50978	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462665	100184217	\N	100.00
-100973626	50849	ortholog_one2one	0	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	0.00
-100973657	50880	ortholog_one2one	0	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	0.00
-100973664	50876	ortholog_one2one	0	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	0.00
-100973677	51087	within_species_paralog	1	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	\N
-100973686	21183	within_species_paralog	1	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	\N
-100973700	50684	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462680	100184217	\N	100.00
-100973750	50840	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973760	50682	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100973767	50694	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100973796	50745	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100973826	100049	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973859	51044	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973864	51044	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973878	50716	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	\N
-100973887	50700	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973894	50697	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	\N
-100973901	50740	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973938	50728	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00
-100973949	50725	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100973979	50728	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100974018	50930	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100974440	50888	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00
-100974865	50815	within_species_paralog	1	\N	\N	\N	\N	\N	40102037	100462642	100184217	\N	\N
-100978519	50971	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100979187	50902	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100979935	50972	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100980569	50942	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100980934	50946	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100981298	50971	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100981727	50955	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100982199	50960	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100982632	50963	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100983141	50972	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100983577	50924	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100983946	50942	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100984355	50979	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100984728	50971	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100985052	50922	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100985299	50956	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100985605	50892	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100986037	50970	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100986388	50946	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100986709	50948	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100987544	50963	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100987812	51286	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100988112	51286	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100988412	50979	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100988787	50975	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100989148	50922	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100989471	50918	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100989750	50973	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
-100990017	51286	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N
+100971935	50908	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462673	100184217	\N	100.00	\N
+100971951	50958	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462672	100184217	\N	100.00	\N
+100971983	50884	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462671	100184217	\N	100.00	\N
+100972047	51020	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462670	100184217	\N	100.00	\N
+100972055	50961	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462670	100184217	\N	100.00	\N
+100972095	50920	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462669	100184217	\N	100.00	\N
+100972259	100019	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	100.00	\N
+100972309	50950	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	\N	\N
+100972409	50914	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	\N	\N
+100972489	50976	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462668	100184217	\N	100.00	\N
+100972657	50981	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462667	100184217	\N	100.00	\N
+100972799	50974	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462666	100184217	\N	100.00	\N
+100973398	50978	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462665	100184217	\N	100.00	\N
+100973626	50849	ortholog_one2one	0	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	0.00	\N
+100973657	50880	ortholog_one2one	0	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	0.00	\N
+100973664	50876	ortholog_one2one	0	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	0.00	\N
+100973677	51087	within_species_paralog	1	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	\N	\N
+100973686	21183	within_species_paralog	1	\N	\N	\N	\N	\N	40102037	100462664	100184217	\N	\N	\N
+100973700	50684	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462680	100184217	\N	100.00	\N
+100973750	50840	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973760	50682	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100973767	50694	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100973796	50745	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100973826	100049	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973859	51044	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973864	51044	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973878	50716	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	\N	\N
+100973887	50700	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973894	50697	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	\N	\N
+100973901	50740	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973938	50728	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	0.00	\N
+100973949	50725	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100973979	50728	ortholog_one2many	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100974018	50930	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100974440	50888	ortholog_one2one	1	\N	\N	\N	\N	\N	40102037	100462663	100184217	\N	100.00	\N
+100974865	50815	within_species_paralog	1	\N	\N	\N	\N	\N	40102037	100462642	100184217	\N	\N	\N
+100978519	50971	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100979187	50902	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100979935	50972	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100980569	50942	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100980934	50946	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100981298	50971	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100981727	50955	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100982199	50960	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100982632	50963	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100983141	50972	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100983577	50924	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100983946	50942	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100984355	50979	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100984728	50971	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100985052	50922	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100985299	50956	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100985605	50892	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100986037	50970	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100986388	50946	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100986709	50948	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100987544	50963	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100987812	51286	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100988112	51286	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100988412	50979	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100988787	50975	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100989148	50922	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100989471	50918	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100989750	50973	ortholog_one2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
+100990017	51286	ortholog_many2many	0	\N	\N	\N	\N	\N	40102008	100184217	100184217	\N	\N	\N
diff --git a/modules/t/test-genome-DBs/multi/compara/meta.txt b/modules/t/test-genome-DBs/multi/compara/meta.txt
index 5973dd266b3febc4acc9db1d0ad55fbd2294e3ec..edd5fd02a7c3995c681717c86a6a3ffe14ca5ddc 100644
--- a/modules/t/test-genome-DBs/multi/compara/meta.txt
+++ b/modules/t/test-genome-DBs/multi/compara/meta.txt
@@ -13,3 +13,5 @@
 14	\N	patch	patch_85_86_a.sql|schema_version
 15	\N	patch	patch_85_86_b.sql|species_tree_root.species_tree
 16	\N	patch	patch_85_86_c.sql|gene_tree_root.species_tree_root_id
+17	\N	patch	patch_85_86_d.sql|homology.high_confidence
+18	\N	patch	patch_85_86_e.sql|gene_member_hom_stats
diff --git a/modules/t/test-genome-DBs/multi/compara/table.sql b/modules/t/test-genome-DBs/multi/compara/table.sql
index 01f6ca470eec7028117f5d63f85a9ac4ed2ade29..fe0fcec91270b2584d7af74e617f4b3c059dfa77 100644
--- a/modules/t/test-genome-DBs/multi/compara/table.sql
+++ b/modules/t/test-genome-DBs/multi/compara/table.sql
@@ -133,12 +133,6 @@ CREATE TABLE `gene_member` (
   `dnafrag_end` int(10) DEFAULT NULL,
   `dnafrag_strand` tinyint(4) DEFAULT NULL,
   `display_label` varchar(128) DEFAULT NULL,
-  `families` tinyint(1) unsigned DEFAULT '0',
-  `gene_trees` tinyint(1) unsigned DEFAULT '0',
-  `gene_gain_loss_trees` tinyint(1) unsigned DEFAULT '0',
-  `orthologues` int(10) unsigned DEFAULT '0',
-  `paralogues` int(10) unsigned DEFAULT '0',
-  `homoeologues` int(10) unsigned DEFAULT '0',
   PRIMARY KEY (`gene_member_id`),
   UNIQUE KEY `stable_id` (`stable_id`),
   KEY `taxon_id` (`taxon_id`),
@@ -149,6 +143,18 @@ CREATE TABLE `gene_member` (
   KEY `dnafrag_id_end` (`dnafrag_id`,`dnafrag_end`)
 ) ENGINE=MyISAM AUTO_INCREMENT=100281325 DEFAULT CHARSET=latin1 MAX_ROWS=100000000;
 
+CREATE TABLE `gene_member_hom_stats` (
+  `gene_member_id` int(10) unsigned NOT NULL,
+  `collection` varchar(40) NOT NULL,
+  `families` int(10) unsigned NOT NULL DEFAULT '0',
+  `gene_trees` tinyint(1) unsigned NOT NULL DEFAULT '0',
+  `gene_gain_loss_trees` tinyint(1) unsigned NOT NULL DEFAULT '0',
+  `orthologues` int(10) unsigned NOT NULL DEFAULT '0',
+  `paralogues` int(10) unsigned NOT NULL DEFAULT '0',
+  `homoeologues` int(10) unsigned NOT NULL DEFAULT '0',
+  PRIMARY KEY (`gene_member_id`,`collection`)
+) ENGINE=MyISAM DEFAULT CHARSET=latin1;
+
 CREATE TABLE `gene_tree_node` (
   `node_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
   `parent_id` int(10) unsigned DEFAULT NULL,
@@ -280,7 +286,7 @@ CREATE TABLE `genomic_align` (
   KEY `method_link_species_set_id` (`method_link_species_set_id`),
   KEY `dnafrag` (`dnafrag_id`,`method_link_species_set_id`,`dnafrag_start`,`dnafrag_end`),
   KEY `node_id` (`node_id`)
-) ENGINE=MyISAM DEFAULT CHARSET=latin1 MAX_ROWS=1000000000 AVG_ROW_LENGTH=60;
+) ENGINE=MyISAM AUTO_INCREMENT=6770002296671 DEFAULT CHARSET=latin1 MAX_ROWS=1000000000 AVG_ROW_LENGTH=60;
 
 CREATE TABLE `genomic_align_block` (
   `genomic_align_block_id` bigint(20) unsigned NOT NULL AUTO_INCREMENT,
@@ -292,7 +298,7 @@ CREATE TABLE `genomic_align_block` (
   `level_id` tinyint(2) unsigned NOT NULL DEFAULT '0',
   PRIMARY KEY (`genomic_align_block_id`),
   KEY `method_link_species_set_id` (`method_link_species_set_id`)
-) ENGINE=MyISAM DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=6770001148336 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `genomic_align_tree` (
   `node_id` bigint(20) unsigned NOT NULL AUTO_INCREMENT,
@@ -351,6 +357,7 @@ CREATE TABLE `homology` (
   `gene_tree_root_id` int(10) unsigned DEFAULT NULL,
   `goc_score` tinyint(3) unsigned DEFAULT NULL,
   `wga_coverage` decimal(5,2) DEFAULT NULL,
+  `is_high_confidence` tinyint(1) DEFAULT NULL,
   PRIMARY KEY (`homology_id`),
   KEY `method_link_species_set_id` (`method_link_species_set_id`),
   KEY `species_tree_node_id` (`species_tree_node_id`),
@@ -399,7 +406,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`(255)),
   KEY `species_value_idx` (`species_id`,`meta_value`(255))
-) ENGINE=MyISAM AUTO_INCREMENT=17 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=19 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `method_link` (
   `method_link_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
@@ -639,5 +646,5 @@ CREATE TABLE `synteny_region` (
   `method_link_species_set_id` int(10) unsigned NOT NULL,
   PRIMARY KEY (`synteny_region_id`),
   KEY `method_link_species_set_id` (`method_link_species_set_id`)
-) ENGINE=MyISAM DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=51494 DEFAULT CHARSET=latin1;
 
diff --git a/modules/t/test-genome-DBs/mus_musculus/core/meta.txt b/modules/t/test-genome-DBs/mus_musculus/core/meta.txt
index d38cb52fb70f0f3ed300345db603480b1d867397..0ef7d07bc41dc891504ba253635b127aa284f587 100644
--- a/modules/t/test-genome-DBs/mus_musculus/core/meta.txt
+++ b/modules/t/test-genome-DBs/mus_musculus/core/meta.txt
@@ -156,3 +156,4 @@
 1668	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 1669	\N	patch	patch_85_86_a.sql|schema_version
 1670	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+1671	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/mus_musculus/variation/meta.txt b/modules/t/test-genome-DBs/mus_musculus/variation/meta.txt
index b33a40692f91a6cc511c9087a3d66f1ba14c8641..f463d9041cae1dc2739bd3599ac893521115c7bf 100644
--- a/modules/t/test-genome-DBs/mus_musculus/variation/meta.txt
+++ b/modules/t/test-genome-DBs/mus_musculus/variation/meta.txt
@@ -1,5 +1,5 @@
 1	\N	schema_type	variation
-2	\N	schema_version	85
+2	\N	schema_version	86
 6	1	species.production_name	mus_musculus
 15	1	web_config	sv_study#Keane 2011 (DGVa study estd118)#Keane 2011#estd118
 14	1	web_config	set#All failed variants#All failed variants#variation_set_fail_all#failed
@@ -37,3 +37,6 @@
 43	\N	patch	patch_84_85_e.sql|drop the table tagged_variation_feature
 44	\N	patch	patch_84_85_f.sql|add phenotype_ontology_accession
 45	\N	patch	patch_84_85_g.sql|allow the column description to store more text in the source table
+46	\N	patch	patch_85_86_a.sql|schema version
+47	\N	patch	patch_85_86_b.sql|add qualifier & index to phenotype_onology_accession
+48	\N	patch	patch_85_86_c.sql|add index on study.external_reference
diff --git a/modules/t/test-genome-DBs/mus_musculus/variation/table.sql b/modules/t/test-genome-DBs/mus_musculus/variation/table.sql
index cd24c58ae9d470b8e1f870375e09d51c67411923..7bc1ffca40ca2626b73a8959bf1cc40aa3d4127b 100644
--- a/modules/t/test-genome-DBs/mus_musculus/variation/table.sql
+++ b/modules/t/test-genome-DBs/mus_musculus/variation/table.sql
@@ -168,7 +168,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=46 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=49 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) NOT NULL,
@@ -238,8 +238,10 @@ CREATE TABLE `phenotype_feature_attrib` (
 CREATE TABLE `phenotype_ontology_accession` (
   `phenotype_id` int(11) unsigned NOT NULL,
   `accession` varchar(255) NOT NULL,
-  `linked_by_attrib` set('437','438','439','440','441','442') DEFAULT NULL,
-  PRIMARY KEY (`phenotype_id`,`accession`)
+  `mapped_by_attrib` set('437','438','439','440','441','442','443','444') DEFAULT NULL,
+  `mapping_type` enum('is','involves') DEFAULT NULL,
+  PRIMARY KEY (`phenotype_id`,`accession`),
+  KEY `accession_idx` (`accession`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1;
 
 CREATE TABLE `population` (
@@ -477,7 +479,8 @@ CREATE TABLE `study` (
   `external_reference` varchar(255) DEFAULT NULL,
   `study_type` varchar(255) DEFAULT NULL,
   PRIMARY KEY (`study_id`),
-  KEY `source_idx` (`source_id`)
+  KEY `source_idx` (`source_id`),
+  KEY `external_reference_idx` (`external_reference`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1;
 
 CREATE TABLE `submitter_handle` (
diff --git a/modules/t/test-genome-DBs/nameless/core/meta.txt b/modules/t/test-genome-DBs/nameless/core/meta.txt
index 6b4ab5f4e5b4308c520b7cce7b67d7c4599454f9..f29f4211be5a940e1d85abfb523ce51e9cd3be95 100644
--- a/modules/t/test-genome-DBs/nameless/core/meta.txt
+++ b/modules/t/test-genome-DBs/nameless/core/meta.txt
@@ -76,3 +76,5 @@
 130	\N	patch	patch_84_85_a.sql|schema_version
 131	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 132	\N	patch	patch_85_86_a.sql|schema_version
+133	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+134	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/polyploidy/core/meta.txt b/modules/t/test-genome-DBs/polyploidy/core/meta.txt
index 9d007a68edf3a514a213e380ba24040359f33661..737c56a316bbc04182ef8f258276391845eddfa0 100644
--- a/modules/t/test-genome-DBs/polyploidy/core/meta.txt
+++ b/modules/t/test-genome-DBs/polyploidy/core/meta.txt
@@ -132,3 +132,4 @@
 212	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 213	\N	patch	patch_85_86_a.sql|schema_version
 214	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+215	\N	patch	patch_85_86_c.sql|meta_case_insensitive
diff --git a/modules/t/test-genome-DBs/test_collection/core/meta.txt b/modules/t/test-genome-DBs/test_collection/core/meta.txt
index d03e33ad8a582f13ea5bc9bf2a5c69fca034a665..6f2557ef72127efc2e06e8b681a0d19561890ce4 100644
--- a/modules/t/test-genome-DBs/test_collection/core/meta.txt
+++ b/modules/t/test-genome-DBs/test_collection/core/meta.txt
@@ -151,3 +151,5 @@
 193	\N	patch	patch_84_85_a.sql|schema_version
 194	\N	patch	patch_84_85_b.sql|remove_duplicated_key
 195	\N	patch	patch_85_86_a.sql|schema_version
+196	\N	patch	patch_85_86_b.sql|add dna_align_feature_attrib table
+197	\N	patch	patch_85_86_c.sql|meta_case_insensitive