From 9fcdf2ee8345bce0dc3d7a3933fb69dc73e204b0 Mon Sep 17 00:00:00 2001
From: Magali Ruffier <mr6@ebi.ac.uk>
Date: Tue, 9 Sep 2014 13:47:03 +0100
Subject: [PATCH] ENSCORESW-978: adding version for
gene/transcript/protein/exon
---
modules/Bio/EnsEMBL/Utils/IO/GTFSerializer.pm | 12 +-
modules/t/gtfSerialiser.t | 128 +++++++++---------
2 files changed, 74 insertions(+), 66 deletions(-)
diff --git a/modules/Bio/EnsEMBL/Utils/IO/GTFSerializer.pm b/modules/Bio/EnsEMBL/Utils/IO/GTFSerializer.pm
index bd8e65ec48..ff91f892a7 100644
--- a/modules/Bio/EnsEMBL/Utils/IO/GTFSerializer.pm
+++ b/modules/Bio/EnsEMBL/Utils/IO/GTFSerializer.pm
@@ -380,21 +380,25 @@ sub _print_attribs {
$vegadb, $has_selenocysteine )
= @_;
- my ( $gene_name, $gene_source );
+ my ( $gene_name, $gene_source, $gene_version );
$gene_name = $gene->external_name;
$gene_name =~ s/^[A-Z]{1,3}:// if $vegadb;
$gene_source = $gene->source;
+ $gene_version = $gene->version;
- my ( $trans_name, $trans_source );
+ my ( $trans_name, $trans_source, $trans_version );
$trans_name = $transcript->external_name;
$trans_name =~ s/^[A-Z]{1,3}:// if $vegadb;
$trans_source = $transcript->source;
+ $trans_version = $transcript->version;
my $fh = $self->{'filehandle'};
print $fh "gene_id \"" . get_id_from_obj($gene) ."\";";
+ print $fh " gene_version \"" . $gene_version . "\";" if $gene_version;
if($type ne 'gene') {
print $fh " transcript_id \"" . get_id_from_obj($transcript) . "\";";
+ print $fh " transcript_version \"" . $trans_version . "\";" if $trans_version;
print $fh " exon_number \"$count\";" if $count > 0;
}
print $fh " gene_name \"" . $gene_name . "\";" if ($gene_name);
@@ -421,9 +425,13 @@ sub _print_attribs {
if ( $type eq 'CDS' ) {
print $fh ' protein_id "' .
get_id_from_obj( $transcript->translation ) . '";';
+ print $fh ' protein_version "' .
+ $transcript->translation->version . "\";" if $transcript->translation->version;
}
if ($exon) {
printf $fh ' exon_id "%s";', get_id_from_obj($exon);
+ print $fh ' exon_version "' .
+ $exon->version . "\";" if $exon->version;
}
if($has_selenocysteine) {
diff --git a/modules/t/gtfSerialiser.t b/modules/t/gtfSerialiser.t
index 480be55924..ba6511a89a 100644
--- a/modules/t/gtfSerialiser.t
+++ b/modules/t/gtfSerialiser.t
@@ -79,86 +79,86 @@ GTF
my $transcripts_gtf =
{
ENST00000310998 => "#!genome-version NCBI33
-20\tensembl\ttranscript\t30274334\t30298904\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
-20\tensembl\texon\t30274334\t30274425\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155821\";
-20\tensembl\tCDS\t30274334\t30274425\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\";
-20\tensembl\texon\t30284451\t30284562\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000859878\";
-20\tensembl\tCDS\t30284451\t30284562\t.\t+\t1\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\";
-20\tensembl\texon\t30285597\t30285782\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661128\";
-20\tensembl\tCDS\t30285597\t30285782\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\";
-20\tensembl\texon\t30295724\t30295792\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991632\";
-20\tensembl\tCDS\t30295724\t30295792\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\";
-20\tensembl\texon\t30296506\t30296579\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"5\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155786\";
-20\tensembl\tCDS\t30296506\t30296579\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"5\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\";
-20\tensembl\texon\t30298823\t30298904\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"6\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001180831\";
-20\tensembl\tCDS\t30298823\t30298904\t.\t+\t1\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000310998\"; exon_number \"6\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\";
+20\tensembl\ttranscript\t30274334\t30298904\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\texon\t30274334\t30274425\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155821\"; exon_version \"1\";
+20\tensembl\tCDS\t30274334\t30274425\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\"; protein_version \"1\";
+20\tensembl\texon\t30284451\t30284562\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000859878\"; exon_version \"1\";
+20\tensembl\tCDS\t30284451\t30284562\t.\t+\t1\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\"; protein_version \"1\";
+20\tensembl\texon\t30285597\t30285782\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661128\"; exon_version \"1\";
+20\tensembl\tCDS\t30285597\t30285782\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\"; protein_version \"1\";
+20\tensembl\texon\t30295724\t30295792\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991632\"; exon_version \"1\";
+20\tensembl\tCDS\t30295724\t30295792\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\"; protein_version \"1\";
+20\tensembl\texon\t30296506\t30296579\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"5\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155786\"; exon_version \"1\";
+20\tensembl\tCDS\t30296506\t30296579\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"5\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\"; protein_version \"1\";
+20\tensembl\texon\t30298823\t30298904\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"6\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001180831\"; exon_version \"1\";
+20\tensembl\tCDS\t30298823\t30298904\t.\t+\t1\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000310998\"; transcript_version \"1\"; exon_number \"6\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf125\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000308980\"; protein_version \"1\";
",
ENST00000278995 => "#!genome-version NCBI33
-20\tensembl\ttranscript\t30285705\t30300924\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
-20\tensembl\texon\t30285705\t30285782\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991635\";
-20\tensembl\tCDS\t30285705\t30285782\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\";
-20\tensembl\texon\t30295724\t30295792\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991632\";
-20\tensembl\tCDS\t30295724\t30295792\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\";
-20\tensembl\texon\t30298823\t30298913\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991636\";
-20\tensembl\tCDS\t30298823\t30298913\t.\t+\t0\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\";
-20\tensembl\texon\t30300869\t30300924\t.\t+\t.\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991637\";
-20\tensembl\tCDS\t30300869\t30300924\t.\t+\t2\tgene_id \"ENSG00000131044\"; transcript_id \"ENST00000278995\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\";
+20\tensembl\ttranscript\t30285705\t30300924\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\texon\t30285705\t30285782\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991635\"; exon_version \"1\";
+20\tensembl\tCDS\t30285705\t30285782\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\"; protein_version \"1\";
+20\tensembl\texon\t30295724\t30295792\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991632\"; exon_version \"1\";
+20\tensembl\tCDS\t30295724\t30295792\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\"; protein_version \"1\";
+20\tensembl\texon\t30298823\t30298913\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991636\"; exon_version \"1\";
+20\tensembl\tCDS\t30298823\t30298913\t.\t+\t0\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\"; protein_version \"1\";
+20\tensembl\texon\t30300869\t30300924\t.\t+\t.\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000991637\"; exon_version \"1\";
+20\tensembl\tCDS\t30300869\t30300924\t.\t+\t2\tgene_id \"ENSG00000131044\"; gene_version \"1\"; transcript_id \"ENST00000278995\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"C20orf125\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9BR18\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000278995\"; protein_version \"1\";
",
ENST00000252021 => "#!genome-version NCBI33
-20\tensembl\ttranscript\t30301733\t30318881\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
-20\tensembl\texon\t30301733\t30301887\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"1\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155773\";
-20\tensembl\tCDS\t30301733\t30301887\t.\t+\t0\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"1\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\";
-20\tensembl\texon\t30309589\t30309718\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"2\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001180789\";
-20\tensembl\tCDS\t30309589\t30309718\t.\t+\t1\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"2\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\";
-20\tensembl\texon\t30310552\t30310748\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001048784\";
-20\tensembl\tCDS\t30310552\t30310748\t.\t+\t0\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\";
-20\tensembl\texon\t30313256\t30313369\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"4\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001048782\";
-20\tensembl\tCDS\t30313256\t30313369\t.\t+\t1\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"4\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\";
-20\tensembl\texon\t30315002\t30315126\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155819\";
-20\tensembl\tCDS\t30315002\t30315126\t.\t+\t1\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\";
-20\tensembl\texon\t30318805\t30318881\t.\t+\t.\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"6\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001180793\";
-20\tensembl\tCDS\t30318805\t30318878\t.\t+\t2\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"6\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\";
-20\tensembl\tstop_codon\t30318879\t30318881\t.\t+\t0\tgene_id \"ENSG00000174873\"; transcript_id \"ENST00000252021\"; exon_number \"6\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\ttranscript\t30301733\t30318881\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\texon\t30301733\t30301887\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"1\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155773\"; exon_version \"1\";
+20\tensembl\tCDS\t30301733\t30301887\t.\t+\t0\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"1\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\"; protein_version \"1\";
+20\tensembl\texon\t30309589\t30309718\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"2\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001180789\"; exon_version \"1\";
+20\tensembl\tCDS\t30309589\t30309718\t.\t+\t1\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"2\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\"; protein_version \"1\";
+20\tensembl\texon\t30310552\t30310748\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001048784\"; exon_version \"1\";
+20\tensembl\tCDS\t30310552\t30310748\t.\t+\t0\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\"; protein_version \"1\";
+20\tensembl\texon\t30313256\t30313369\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"4\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001048782\"; exon_version \"1\";
+20\tensembl\tCDS\t30313256\t30313369\t.\t+\t1\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"4\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\"; protein_version \"1\";
+20\tensembl\texon\t30315002\t30315126\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155819\"; exon_version \"1\";
+20\tensembl\tCDS\t30315002\t30315126\t.\t+\t1\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\"; protein_version \"1\";
+20\tensembl\texon\t30318805\t30318881\t.\t+\t.\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"6\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001180793\"; exon_version \"1\";
+20\tensembl\tCDS\t30318805\t30318878\t.\t+\t2\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"6\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000252021\"; protein_version \"1\";
+20\tensembl\tstop_codon\t30318879\t30318881\t.\t+\t0\tgene_id \"ENSG00000174873\"; gene_version \"1\"; transcript_id \"ENST00000252021\"; transcript_version \"1\"; exon_number \"6\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
",
ENST00000202017 => "#!genome-version NCBI33
-20\tvega\ttranscript\t30320853\t30327869\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\";
-20\tvega\texon\t30327735\t30327869\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"1\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155739\";
-20\tvega\tCDS\t30327735\t30327869\t.\t-\t0\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"1\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\";
-20\tvega\texon\t30326172\t30326247\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"2\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661139\";
-20\tvega\tCDS\t30326172\t30326247\t.\t-\t0\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"2\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\";
-20\tvega\texon\t30324668\t30324742\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"3\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661138\";
-20\tvega\tCDS\t30324668\t30324742\t.\t-\t2\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"3\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\";
-20\tvega\texon\t30322356\t30322436\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"4\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661137\";
-20\tvega\tCDS\t30322356\t30322436\t.\t-\t2\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"4\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\";
-20\tvega\texon\t30320853\t30321749\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"5\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001109504\";
-20\tvega\tCDS\t30321670\t30321749\t.\t-\t2\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; exon_number \"5\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\";
-20\tvega\tUTR\t30320853\t30321669\t.\t-\t.\tgene_id \"ENSG00000088356\"; transcript_id \"ENST00000202017\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\";
+20\tvega\ttranscript\t30320853\t30327869\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\";
+20\tvega\texon\t30327735\t30327869\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001155739\"; exon_version \"1\";
+20\tvega\tCDS\t30327735\t30327869\t.\t-\t0\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\"; protein_version \"1\";
+20\tvega\texon\t30326172\t30326247\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661139\"; exon_version \"1\";
+20\tvega\tCDS\t30326172\t30326247\t.\t-\t0\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\"; protein_version \"1\";
+20\tvega\texon\t30324668\t30324742\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661138\"; exon_version \"1\";
+20\tvega\tCDS\t30324668\t30324742\t.\t-\t2\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\"; protein_version \"1\";
+20\tvega\texon\t30322356\t30322436\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661137\"; exon_version \"1\";
+20\tvega\tCDS\t30322356\t30322436\t.\t-\t2\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\"; protein_version \"1\";
+20\tvega\texon\t30320853\t30321749\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"5\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00001109504\"; exon_version \"1\";
+20\tvega\tCDS\t30321670\t30321749\t.\t-\t2\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; exon_number \"5\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000202017\"; protein_version \"1\";
+20\tvega\tUTR\t30320853\t30321669\t.\t-\t.\tgene_id \"ENSG00000088356\"; gene_version \"1\"; transcript_id \"ENST00000202017\"; transcript_version \"1\"; gene_name \"C20orf126\"; gene_source \"vega\"; gene_biotype \"protein_coding\"; transcript_name \"C20orf126\"; transcript_source \"vega\"; transcript_biotype \"protein_coding\";
",
ENST00000246203 => "#!genome-version NCBI33
-20\tensembl\ttranscript\t30565065\t30566129\t.\t-\t.\tgene_id \"ENSG00000125979\"; transcript_id \"ENST00000246203\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
-20\tensembl\texon\t30565065\t30566129\t.\t-\t.\tgene_id \"ENSG00000125979\"; transcript_id \"ENST00000246203\"; exon_number \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000859919\";
-20\tensembl\tCDS\t30565065\t30566129\t.\t-\t0\tgene_id \"ENSG00000125979\"; transcript_id \"ENST00000246203\"; exon_number \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000246203\";
-20\tensembl\tstart_codon\t30566127\t30566129\t.\t-\t0\tgene_id \"ENSG00000125979\"; transcript_id \"ENST00000246203\"; exon_number \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\ttranscript\t30565065\t30566129\t.\t-\t.\tgene_id \"ENSG00000125979\"; gene_version \"1\"; transcript_id \"ENST00000246203\"; transcript_version \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\texon\t30565065\t30566129\t.\t-\t.\tgene_id \"ENSG00000125979\"; gene_version \"1\"; transcript_id \"ENST00000246203\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000859919\"; exon_version \"1\";
+20\tensembl\tCDS\t30565065\t30566129\t.\t-\t0\tgene_id \"ENSG00000125979\"; gene_version \"1\"; transcript_id \"ENST00000246203\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000246203\"; protein_version \"1\";
+20\tensembl\tstart_codon\t30566127\t30566129\t.\t-\t0\tgene_id \"ENSG00000125979\"; gene_version \"1\"; transcript_id \"ENST00000246203\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"TSPYL3\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"TSPYL3\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
",
ENST00000201961 => "#!genome-version NCBI33
-20\tensembl\ttranscript\t30885729\t30911383\t.\t-\t.\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
-20\tensembl\texon\t30911297\t30911383\t.\t-\t.\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661216\";
-20\tensembl\tCDS\t30911297\t30911383\t.\t-\t0\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\";
-20\tensembl\tstart_codon\t30911381\t30911383\t.\t-\t0\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
-20\tensembl\texon\t30903618\t30903773\t.\t-\t.\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"2\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661215\";
-20\tensembl\tCDS\t30903618\t30903773\t.\t-\t0\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"2\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\";
-20\tensembl\texon\t30896671\t30896782\t.\t-\t.\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"3\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000560920\";
-20\tensembl\tCDS\t30896671\t30896782\t.\t-\t0\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"3\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\";
-20\tensembl\texon\t30887207\t30887316\t.\t-\t.\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"4\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000560923\";
-20\tensembl\tCDS\t30887207\t30887316\t.\t-\t2\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"4\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\";
-20\tensembl\texon\t30885729\t30885800\t.\t-\t.\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"5\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661212\";
-20\tensembl\tCDS\t30885729\t30885800\t.\t-\t0\tgene_id \"ENSG00000088303\"; transcript_id \"ENST00000201961\"; exon_number \"5\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\";
+20\tensembl\ttranscript\t30885729\t30911383\t.\t-\t.\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\texon\t30911297\t30911383\t.\t-\t.\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661216\"; exon_version \"1\";
+20\tensembl\tCDS\t30911297\t30911383\t.\t-\t0\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\"; protein_version \"1\";
+20\tensembl\tstart_codon\t30911381\t30911383\t.\t-\t0\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"1\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\";
+20\tensembl\texon\t30903618\t30903773\t.\t-\t.\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661215\"; exon_version \"1\";
+20\tensembl\tCDS\t30903618\t30903773\t.\t-\t0\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"2\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\"; protein_version \"1\";
+20\tensembl\texon\t30896671\t30896782\t.\t-\t.\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000560920\"; exon_version \"1\";
+20\tensembl\tCDS\t30896671\t30896782\t.\t-\t0\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"3\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\"; protein_version \"1\";
+20\tensembl\texon\t30887207\t30887316\t.\t-\t.\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000560923\"; exon_version \"1\";
+20\tensembl\tCDS\t30887207\t30887316\t.\t-\t2\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"4\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\"; protein_version \"1\";
+20\tensembl\texon\t30885729\t30885800\t.\t-\t.\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"5\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; exon_id \"ENSE00000661212\"; exon_version \"1\";
+20\tensembl\tCDS\t30885729\t30885800\t.\t-\t0\tgene_id \"ENSG00000088303\"; gene_version \"1\"; transcript_id \"ENST00000201961\"; transcript_version \"1\"; exon_number \"5\"; gene_name \"Q9NQF5\"; gene_source \"ensembl\"; gene_biotype \"protein_coding\"; transcript_name \"Q9NQF5\"; transcript_source \"ensembl\"; transcript_biotype \"protein_coding\"; protein_id \"ENSP00000201961\"; protein_version \"1\";
"
};
--
GitLab