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ensembl-gh-mirror
ensembl
Commits
a3c8af90
Commit
a3c8af90
authored
Aug 12, 2013
by
Magali Ruffier
Browse files
replaced reg with explicity region variable
we have too many reg starting variables to use shortened names
parent
dde18a30
Changes
1
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-2
modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm
+2
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modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm
View file @
a3c8af90
...
...
@@ -1759,9 +1759,9 @@ sub fetch_normalized_slice_projection {
my
$hap_start
=
1
;
my
$last
=
0
;
my
$seq_reg_slice
=
$self
->
fetch_by_seq_region_id
(
$slice_seq_region_id
);
my
$seq_reg
ion
_slice
=
$self
->
fetch_by_seq_region_id
(
$slice_seq_region_id
);
my
$exc_slice
=
$self
->
fetch_by_seq_region_id
(
$sort_haps
[
0
][
2
]
);
my
$len1
=
$seq_reg_slice
->
length
();
my
$len1
=
$seq_reg
ion
_slice
->
length
();
my
$len2
=
$exc_slice
->
length
();
my
$max_len
=
(
$len1
>
$len2
)
?
$len1
:
$len2
;
...
...
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