Skip to content
GitLab
Menu
Projects
Groups
Snippets
Loading...
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Sign in
Toggle navigation
Menu
Open sidebar
ensembl-gh-mirror
ensembl
Commits
aa4155d0
Commit
aa4155d0
authored
Jun 11, 2019
by
Marek Szuba
Browse files
Enable VGNC xrefs for felis_catus, macaca_mulatta and microcebus_murinus
parent
5b3acb25
Changes
1
Show whitespace changes
Inline
Side-by-side
Showing
1 changed file
with
39 additions
and
0 deletions
+39
-0
misc-scripts/xref_mapping/xref_config.ini
misc-scripts/xref_mapping/xref_config.ini
+39
-0
No files found.
misc-scripts/xref_mapping/xref_config.ini
View file @
aa4155d0
...
@@ -502,6 +502,33 @@ priority = 1
...
@@ -502,6 +502,33 @@ priority = 1
parser
=
VGNCParser
parser
=
VGNCParser
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/genenames/vgnc/tsv/vgnc_gene_set_All.txt.gz
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/genenames/vgnc/tsv/vgnc_gene_set_All.txt.gz
[source VGNC::felis_catus]
# Used by felis_catus
name
=
VGNC
download
=
Y
order
=
29
priority
=
1
parser
=
VGNCParser
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/genenames/vgnc/tsv/vgnc_gene_set_All.txt.gz
[source VGNC::macaca_mulatta]
# Used by macaca_mulatta
name
=
VGNC
download
=
Y
order
=
29
priority
=
1
parser
=
VGNCParser
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/genenames/vgnc/tsv/vgnc_gene_set_All.txt.gz
[source VGNC::microcebus_murinus]
# Used by microcebus_murinus
name
=
VGNC
download
=
Y
order
=
29
priority
=
1
parser
=
VGNCParser
data_uri
=
ftp://ftp.ebi.ac.uk/pub/databases/genenames/vgnc/tsv/vgnc_gene_set_All.txt.gz
[source HGNC::homo_sapiens#01]
[source HGNC::homo_sapiens#01]
# Used by homo_sapiens
# Used by homo_sapiens
name
=
HGNC
name
=
HGNC
...
@@ -1891,6 +1918,18 @@ source = VGNC::equus_caballus
...
@@ -1891,6 +1918,18 @@ source = VGNC::equus_caballus
taxonomy_id
=
9598
taxonomy_id
=
9598
source
=
VGNC::pan_troglodytes
source
=
VGNC::pan_troglodytes
[species felis_catus]
taxonomy_id
=
9685
source
=
VGNC::felis_catus
[species macaca_mulatta]
taxonomy_id
=
9544
source
=
VGNC::macaca_mulatta
[species microcebus_murinus]
taxonomy_id
=
30608
source
=
VGNC::microcebus_murinus
[species ciona_intestinalis]
[species ciona_intestinalis]
taxonomy_id
=
7719
taxonomy_id
=
7719
source
=
cint_aniseed_v1::ciona_intestinalis
source
=
cint_aniseed_v1::ciona_intestinalis
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment