diff --git a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm index c20543083d815b409d923aadc6c92d1ccc697696..b75aef54091f22ed0ace2177c8d4376a7c6f3a16 100644 --- a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm +++ b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm @@ -168,10 +168,10 @@ sub create_xrefs { my %dependent_sources = $self->get_dependent_xref_sources(); # name-id hash - - if(defined($dependent_sources{'HGNC'})){ - $dependent_sources{'HGNC'} = XrefParser::BaseParser->get_source_id_for_source_name("HGNC","uniprot"); - } +# get from HGNC file +# if(defined($dependent_sources{'HGNC'})){ +# $dependent_sources{'HGNC'} = XrefParser::BaseParser->get_source_id_for_source_name("HGNC","uniprot"); +# } if(defined($dependent_sources{'MGI'})){ $dependent_sources{'MGI'} = XrefParser::BaseParser->get_source_id_for_source_name("MGI","uniprot"); @@ -488,6 +488,9 @@ sub create_xrefs { if($source =~ "UCSC"){ next; } + if($source =~ "HGNC"){ + next; + } if (exists $dependent_sources{$source} ) { # create dependent xref structure & store it my %dep;