From aac807490a79f3f5c93daade7ea264268d27f1e3 Mon Sep 17 00:00:00 2001 From: Bronwen Aken <ba1@sanger.ac.uk> Date: Wed, 28 Oct 2009 13:42:56 +0000 Subject: [PATCH] added ncbigene --- misc-scripts/analysis_description/analysis.descriptions | 2 ++ 1 file changed, 2 insertions(+) diff --git a/misc-scripts/analysis_description/analysis.descriptions b/misc-scripts/analysis_description/analysis.descriptions index d78169cd6c..89ac75afcc 100644 --- a/misc-scripts/analysis_description/analysis.descriptions +++ b/misc-scripts/analysis_description/analysis.descriptions @@ -355,6 +355,8 @@ 355 baboon_cdna Baboon cDNAs from <a rel="external" href="http://www.ncbi.nlm.nih.gov/RefSeq/">NCBI RefSeq</a> and <a rel="external" href="http://www.ebi.ac.uk/embl/">EMBL</a> are aligned to the genome using <a rel="external" href="http://www.biomedcentral.com/1471-2105/6/31">Exonerate</a>. Baboon RefSeq/EMBL cDNA 1 {'dna_align_feature' => {'do_not_display' => '0'},'default' => {'contigviewbottom' => 'stack'},'type' => 'cdna'} 356 gorilla_cdna Gorilla cDNAs from <a rel="external" href="http://www.ncbi.nlm.nih.gov/RefSeq/">NCBI RefSeq</a> and <a rel="external" href="http://www.ebi.ac.uk/embl/">EMBL</a> are aligned to the genome using <a rel="external" href="http://www.biomedcentral.com/1471-2105/6/31">Exonerate</a>. Gorilla RefSeq/EMBL cDNA 1 {'dna_align_feature' => {'do_not_display' => '0'},'default' => {'contigviewbottom' => 'stack'},'type' => 'cdna'} 357 gorilla_protein Gorilla proteins from <a rel="external" href="http://www.ncbi.nlm.nih.gov/RefSeq/">NCBI RefSeq</a> and <a rel="external" href="http://uniprot.org">UniProtKB/TrEMBL</a> are aligned to the genome using <a rel="external" href="http://genome.cshlp.org/cgi/content/abstract/14/5/988?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&andorexactfulltext=and&searchid=1&FIRSTINDEX=0&sortspec=relevance&volume=14&firstpage=988&resourcetype=HWCIT">GeneWise</a>. Gorilla prot. 1 +358 refseq_human_import Human RefSeq gene models from <a rel="external" href="http://www.ncbi.nlm.nih.gov/RefSeq/">NCBI RefSeq</a> are imported directly into Ensembl. Human RefSeq import 1 {'label_key' => '[text_label] [display_label]','label' => '[text_label] [display_label]'} + #add new entries for core databases above, the following are for functional genomics #500 Nessie Hidden Markov Model based predictions based on tiling array data Nessie (TilingHMM) 1 -- GitLab