From acf001c9119c6f6e09a6701f18fd6fc5d6b4d7aa Mon Sep 17 00:00:00 2001
From: Philip Lijnzaad <lijnzaad@sanger.ac.uk>
Date: Thu, 11 Oct 2001 17:10:42 +0000
Subject: [PATCH] added and tested mouse
---
misc-scripts/utilities/satellite_dbdump_bychr.pl | 10 ++++++++++
1 file changed, 10 insertions(+)
diff --git a/misc-scripts/utilities/satellite_dbdump_bychr.pl b/misc-scripts/utilities/satellite_dbdump_bychr.pl
index 850f00b282..db7dd53090 100755
--- a/misc-scripts/utilities/satellite_dbdump_bychr.pl
+++ b/misc-scripts/utilities/satellite_dbdump_bychr.pl
@@ -90,6 +90,7 @@ my $expressiondb;
my $snpdb;
my $embldb;
my $estdb;
+my $mousedb;
# end of satellites
&GetOptions(
@@ -109,6 +110,7 @@ my $estdb;
'snp:s' => \$snpdb,
'embl:s' => \$embldb,
'est:s' => \$estdb,
+ 'mouse:s' => \$mousedb,
'mega:s' => \$template, #dump all known ones, using $template
);
@@ -133,6 +135,7 @@ if ($template) { #
&dump_snp( template_fill($template, 'snp'));
&dump_embl( template_fill($template, 'embl'));
&dump_est( template_fill($template, 'est'));
+ &dump_mouse( template_fill($template, 'mouse'));
} else {
@@ -144,6 +147,7 @@ if ($template) { #
&dump_snp($snpdb);
&dump_embl($embldb);
&dump_est($estdb);
+ &dump_mouse($mousedb);
}
@@ -673,6 +677,12 @@ WHERE g.chr_name = '$chr'
return undef;
} # est
+sub dump_mouse {
+ my ($satdb)=@_;
+ return unless $satdb;
+ &dump_est($satdb);
+}
+
sub dump_schema {
my ($satdb) = @_;
--
GitLab