diff --git a/misc-scripts/protein_match/mapping_conf.pl b/misc-scripts/protein_match/mapping_conf.pl index 1baf08f4076be00fb5f46984ac6bab108b6e6eff..44904544d1e96a82283fb17c03b11974df712e3c 100644 --- a/misc-scripts/protein_match/mapping_conf.pl +++ b/misc-scripts/protein_match/mapping_conf.pl @@ -28,10 +28,10 @@ package main; #The mapping to known genes is assymetrical. This is due to the fact that's our gene prediction is quite fragmented compared to the manually curated genes #'query_idt' => 40, - 'query_idt' => 40, + 'query_idt' => , #'target_idt => 10, - 'target_idt' => 10, + 'target_idt' => , @@ -100,11 +100,8 @@ package main; #'ens4' => '/work1/mongin/mapping/primary/ens4.txt', 'ens4' => '', - #Location of the file in .gnp format for the NCBI prediction - #'refseq_pred' => '', - 'refseq_pred' => '', - #Location of the file for GO mapping (gene_association.goa) + #ftp.ebi.ac.uk/pub/databases/GO/goa/HUMAN/gene_association.goa_human.gz #'go' => '', 'go' => '',