From b8a663596b0b4c331c7d10b84665b76168a14414 Mon Sep 17 00:00:00 2001
From: Magali Ruffier <mr6@ebi.ac.uk>
Date: Thu, 10 Oct 2013 14:56:45 +0000
Subject: [PATCH] get_short_name is now deprecated, that meta_key does not
exist in ensembl databases any more we now have a display_name meta_key,
added method get_display_name
---
modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm | 21 ++++++++++++++++++++-
1 file changed, 20 insertions(+), 1 deletion(-)
diff --git a/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm b/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm
index 355d50339c..f752659560 100644
--- a/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/MetaContainer.pm
@@ -79,15 +79,34 @@ sub get_production_name {
example, a short label in a GUI.
Returntype : string
Exceptions : none
- Status : Stable
+ Status : Deprecated in release 74
=cut
sub get_short_name {
my ($self) = @_;
+ deprecate('Call is deprecated. short_name is not in use any more, use get_common_name instead');
return $self->single_value_by_key('species.short_name');
}
+
+=head2 get_display_name
+
+ Args : none
+ Example : $species = $meta_container->get_display_name();
+ Description : Obtains the name of the species in a form usable as, for
+ example, a short label in a GUI.
+ Returntype : string
+ Exceptions : none
+ Status : Stable
+
+=cut
+
+sub get_display_name {
+ my ($self) = @_;
+ return $self->single_value_by_key('species.display_name');
+}
+
=head2 get_common_name
Args : none
--
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