From ba6333975c1447d25524713a0665d212c7c3aac9 Mon Sep 17 00:00:00 2001
From: Eugene Kulesha <ek@ebi.ac.uk>
Date: Fri, 10 Dec 2010 13:27:56 +0000
Subject: [PATCH] remove the constrain on the ontology name - all ontologies
should be handled by the same adaptor
---
modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm | 6 ++----
1 file changed, 2 insertions(+), 4 deletions(-)
diff --git a/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm
index 3f1bf0e81d..87189b2768 100644
--- a/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/OntologyTermAdaptor.pm
@@ -145,13 +145,11 @@ SELECT term.term_id,
ontology.namespace
FROM ontology,
term
-WHERE ontology.name = ?
- AND ontology.ontology_id = term.ontology_id
+WHERE ontology.ontology_id = term.ontology_id
AND term.accession = ?);
my $sth = $this->prepare($statement);
- $sth->bind_param( 1, $this->{'ontology'}, SQL_VARCHAR );
- $sth->bind_param( 2, $accession, SQL_VARCHAR );
+ $sth->bind_param( 1, $accession, SQL_VARCHAR );
$sth->execute();
--
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