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ensembl-gh-mirror
ensembl
Commits
bcaabc50
Commit
bcaabc50
authored
Nov 13, 2002
by
Alistair Rust
Browse files
remove_RawContig -> remove_by_RawContig
parent
193c5112
Changes
2
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2 changed files
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4 additions
and
4 deletions
+4
-4
modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
+3
-3
modules/Bio/EnsEMBL/DBSQL/RawContigAdaptor.pm
modules/Bio/EnsEMBL/DBSQL/RawContigAdaptor.pm
+1
-1
No files found.
modules/Bio/EnsEMBL/DBSQL/BaseFeatureAdaptor.pm
View file @
bcaabc50
...
...
@@ -499,10 +499,10 @@ sub remove {
=head2 remove_RawContig
=head2 remove_
by_
RawContig
Arg [1] : Bio::Ensembl::RawContig $contig
Example : $feature_adaptor->remove_RawContig($contig);
Example : $feature_adaptor->remove_
by_
RawContig($contig);
Description: This removes features from the database which lie on a removed
contig. The table the features are removed from is defined by
the abstract method_tablename, and the primary key of the table
...
...
@@ -513,7 +513,7 @@ sub remove {
=cut
sub
remove_RawContig
{
sub
remove_
by_
RawContig
{
my
(
$self
,
$contig
)
=
@_
;
unless
(
$contig
)
{
...
...
modules/Bio/EnsEMBL/DBSQL/RawContigAdaptor.pm
View file @
bcaabc50
...
...
@@ -607,7 +607,7 @@ sub remove {
if
(
!
$fa
)
{
$self
->
throw
("
Couldn't get a '
$adaptor
'Adaptor
");
}
$fa
->
remove_RawContig
(
$contig
);
$fa
->
remove_
by_
RawContig
(
$contig
);
}
# Delete DNA as long as we aren't using a remote DNA database.
...
...
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