From bde3f098e8ba5c80946ea3e99bca2ffcc7615691 Mon Sep 17 00:00:00 2001 From: Graham McVicker <mcvicker@sanger.ac.uk> Date: Mon, 25 Nov 2002 16:22:21 +0000 Subject: [PATCH] removed use of Bio::DBLinkContainerI --- modules/Bio/EnsEMBL/Gene.pm | 3 +-- modules/Bio/EnsEMBL/Protein.pm | 1 - modules/Bio/EnsEMBL/Transcript.pm | 3 +-- 3 files changed, 2 insertions(+), 5 deletions(-) diff --git a/modules/Bio/EnsEMBL/Gene.pm b/modules/Bio/EnsEMBL/Gene.pm index dd083f584d..841eef206b 100755 --- a/modules/Bio/EnsEMBL/Gene.pm +++ b/modules/Bio/EnsEMBL/Gene.pm @@ -44,12 +44,11 @@ use strict; use Bio::EnsEMBL::Root; use Bio::EnsEMBL::TranscriptI; -use Bio::DBLinkContainerI; use Bio::Annotation::DBLink; use Bio::EnsEMBL::DBEntry; -@ISA = qw(Bio::EnsEMBL::Root Bio::DBLinkContainerI); +@ISA = qw(Bio::EnsEMBL::Root); # new() is inherited from Bio::Root::Object # _initialize is where the heavy stuff will happen when new is called diff --git a/modules/Bio/EnsEMBL/Protein.pm b/modules/Bio/EnsEMBL/Protein.pm index 32acecbabe..94074d9ea6 100644 --- a/modules/Bio/EnsEMBL/Protein.pm +++ b/modules/Bio/EnsEMBL/Protein.pm @@ -56,7 +56,6 @@ use Bio::EnsEMBL::Root; use Bio::SeqI; use Bio::EnsEMBL::Transcript; -use Bio::DBLinkContainerI; use Bio::SeqIO; use Bio::Tools::SeqStats; diff --git a/modules/Bio/EnsEMBL/Transcript.pm b/modules/Bio/EnsEMBL/Transcript.pm index 937e3077a7..54c9ae7611 100755 --- a/modules/Bio/EnsEMBL/Transcript.pm +++ b/modules/Bio/EnsEMBL/Transcript.pm @@ -58,11 +58,10 @@ use Bio::EnsEMBL::Root; use Bio::EnsEMBL::Exon; use Bio::EnsEMBL::Intron; use Bio::EnsEMBL::Translation; -use Bio::DBLinkContainerI; use Bio::EnsEMBL::TranscriptI; use Bio::EnsEMBL::Mapper; -@ISA = qw(Bio::EnsEMBL::Root Bio::DBLinkContainerI Bio::EnsEMBL::TranscriptI); +@ISA = qw(Bio::EnsEMBL::Root Bio::EnsEMBL::TranscriptI); # new() is inherited from Bio::Root::Object sub new { -- GitLab