From be82aa8f8fcf6907f61523e8773d245f9f3fdecd Mon Sep 17 00:00:00 2001
From: Magali Ruffier <mr6@ebi.ac.uk>
Date: Wed, 25 Sep 2013 08:53:07 +0000
Subject: [PATCH] ENSCORESW-660: when looking for EMBL, make sure it is not
ChEMBL ChEMBL xrefs are now being imported
---
misc-scripts/xref_mapping/XrefParser/UniProtParser.pm | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm
index 75cb17505f..9e2953cafe 100644
--- a/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm
+++ b/misc-scripts/xref_mapping/XrefParser/UniProtParser.pm
@@ -501,7 +501,7 @@ sub create_xrefs {
push @{$xref->{DEPENDENT_XREFS}}, \%dep; # array of hashrefs
$seen{$dep{SOURCE_NAME}.":".$dep{ACCESSION}} =1;
}
- if($dep =~ /EMBL/){
+ if($dep =~ /EMBL/ && !($dep =~ /ChEMBL/)){
my ($protein_id) = $extra[0];
if(($protein_id ne "-") and (!defined($seen{$source.":".$protein_id}))){
my %dep2;
--
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