Commit bfcfa1c6 authored by Daniel Rios's avatar Daniel Rios
Browse files

added canonical_transcript information in a gene for testing purposes

parent c579cc49
18256 protein_coding 1282 469283 30274334 30300924 1 152202 ensembl KNOWN DJ310O13.1.2 (NOVEL PROTEIN SIMILAR DROSOPHILA PROTEIN CG7474, ISOFORM 2 ) (FRAGMENT). [Source:SPTREMBL;Acc:Q9BR18] 1 1 \N
18257 protein_coding 1282 469283 30301733 30318881 1 0 ensembl NOVEL \N 1 1 \N
18258 protein_coding 1282 469283 30320853 30327869 -1 40090 vega KNOWN \N 1 1 \N
18259 protein_coding 1282 469283 30371004 30372906 1 102413 ensembl KNOWN DJ310O13.4 (NOVEL PROTEIN SIMILAR TO PREDICTED C. ELEGANS AND C. INTESTINALIS PROTEINS) (FRAGMENT). [Source:SPTREMBL;Acc:Q9NUG5] 1 1 \N
18260 protein_coding 1282 469283 30386305 30408041 1 34986 vega KNOWN \N 1 1 \N
18261 protein_coding 1282 469283 30428114 30477716 1 158525 ensembl KNOWN TYROSINE-PROTEIN KINASE HCK (EC 2.7.1.112) (P59-HCK AND P60-HCK) (HEMOPOIETIC CELL KINASE). [Source:SWISSPROT;Acc:P08631] 1 1 \N
18262 protein_coding 1282 469283 30485596 30543114 1 120576 ensembl KNOWN TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER 4. [Source:SWISSPROT;Acc:Q92544] 1 1 \N
18263 protein_coding 1282 469283 30565065 30566129 -1 128607 ensembl KNOWN BA392M18.1 (NOVEL PROTEIN SIMILAR TO TESTIS SPECIFIC PROTEIN TSPY). [Source:SPTREMBL;Acc:Q9H489] 1 1 \N
18256 protein_coding 1282 469283 30274334 30300924 1 152202 ensembl KNOWN DJ310O13.1.2 (NOVEL PROTEIN SIMILAR DROSOPHILA PROTEIN CG7474, ISOFORM 2 ) (FRAGMENT). [Source:SPTREMBL;Acc:Q9BR18] 1 21716 longest transcript in gene
18257 protein_coding 1282 469283 30301733 30318881 1 0 ensembl NOVEL \N 1 0 \N
18258 protein_coding 1282 469283 30320853 30327869 -1 40090 vega KNOWN \N 1 0 \N
18259 protein_coding 1282 469283 30371004 30372906 1 102413 ensembl KNOWN DJ310O13.4 (NOVEL PROTEIN SIMILAR TO PREDICTED C. ELEGANS AND C. INTESTINALIS PROTEINS) (FRAGMENT). [Source:SPTREMBL;Acc:Q9NUG5] 1 0 \N
18260 protein_coding 1282 469283 30386305 30408041 1 34986 vega KNOWN \N 1 0 \N
18261 protein_coding 1282 469283 30428114 30477716 1 158525 ensembl KNOWN TYROSINE-PROTEIN KINASE HCK (EC 2.7.1.112) (P59-HCK AND P60-HCK) (HEMOPOIETIC CELL KINASE). [Source:SWISSPROT;Acc:P08631] 1 0 \N
18262 protein_coding 1282 469283 30485596 30543114 1 120576 ensembl KNOWN TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER 4. [Source:SWISSPROT;Acc:Q92544] 1 0 \N
18263 protein_coding 1282 469283 30565065 30566129 -1 128607 ensembl KNOWN BA392M18.1 (NOVEL PROTEIN SIMILAR TO TESTIS SPECIFIC PROTEIN TSPY). [Source:SPTREMBL;Acc:Q9H489] 1 0 \N
18264 protein_coding 1282 469283 30568364 30583588 -1 17034 ensembl KNOWN ZINC FINGER PROTEIN PLAGL2 (PLEIOMORPHIC ADENOMA-LIKE PROTEIN 2). [Source:SWISSPROT;Acc:Q9UPG8] 1 1 \N
18265 protein_coding 1282 469283 30583753 30614524 1 128597 ensembl KNOWN GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 PRECURSOR (EC 2.4.1.-) (O- FUCOSYLTRANSFERASE) (O-FUCT-1). [Source:SPTREMBL;Acc:Q9H488] 1 1 \N
18266 protein_coding 1282 469283 30653524 30709209 1 28819 ensembl KNOWN KINESIN-LIKE PROTEIN KIF3B (MICROTUBULE PLUS END-DIRECTED KINESIN MOTOR 3B) (HH0048). [Source:SWISSPROT;Acc:O15066] 1 1 \N
18267 protein_coding 1282 469283 30735607 30815178 1 128324 ensembl KNOWN BA358N2.1 (KIAA0978) (FRAGMENT). [Source:SPTREMBL;Acc:Q9H466] 1 1 \N
18268 protein_coding 1282 469283 30822726 30859269 -1 34892 ensembl KNOWN \N 1 1 \N
18269 protein_coding 1282 469283 30885729 30911383 -1 89323 ensembl KNOWN DJ1184F4.4 (NOVEL PROTEIN SIMILAR TO NUCLEOLAR PROTEIN 4 (NOL4) (NOLP)). [Source:SPTREMBL;Acc:Q9NQF5] 1 1 \N
18270 protein_coding 1282 469283 31070930 31071301 -1 332 ensembl KNOWN \N 1 1 \N
18271 protein_coding 1282 469283 31074431 31089984 -1 168324 ensembl KNOWN \N 1 1 \N
18272 protein_coding 1282 469283 31108924 31155894 1 15966 ensembl KNOWN DNA (CYTOSINE-5)-METHYLTRANSFERASE 3B (EC 2.1.1.37) (DNMT3B) (DNA METHYLTRANSFERASE HSAIIIB) (DNA MTASE HSAIIIB) (M.HSAIIIB). [Source:SWISSPROT;Acc:Q9UBC3] 1 1 \N
18273 protein_coding 1282 469283 31166507 31196939 1 97759 ensembl KNOWN MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 (APC-BINDING PROTEIN EB1). [Source:SWISSPROT;Acc:Q15691] 1 1 \N
18274 protein_coding 1282 469283 31210077 31225346 1 0 ensembl NOVEL \N 1 1 \N
18265 protein_coding 1282 469283 30583753 30614524 1 128597 ensembl KNOWN GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 PRECURSOR (EC 2.4.1.-) (O- FUCOSYLTRANSFERASE) (O-FUCT-1). [Source:SPTREMBL;Acc:Q9H488] 1 0 \N
18266 protein_coding 1282 469283 30653524 30709209 1 28819 ensembl KNOWN KINESIN-LIKE PROTEIN KIF3B (MICROTUBULE PLUS END-DIRECTED KINESIN MOTOR 3B) (HH0048). [Source:SWISSPROT;Acc:O15066] 1 0 1
18267 protein_coding 1282 469283 30735607 30815178 1 128324 ensembl KNOWN BA358N2.1 (KIAA0978) (FRAGMENT). [Source:SPTREMBL;Acc:Q9H466] 1 0 \N
18268 protein_coding 1282 469283 30822726 30859269 -1 34892 ensembl KNOWN \N 1 0 \N
18269 protein_coding 1282 469283 30885729 30911383 -1 89323 ensembl KNOWN DJ1184F4.4 (NOVEL PROTEIN SIMILAR TO NUCLEOLAR PROTEIN 4 (NOL4) (NOLP)). [Source:SPTREMBL;Acc:Q9NQF5] 1 0 \N
18270 protein_coding 1282 469283 31070930 31071301 -1 332 ensembl KNOWN \N 1 0 \N
18271 protein_coding 1282 469283 31074431 31089984 -1 168324 ensembl KNOWN \N 1 0 \N
18272 protein_coding 1282 469283 31108924 31155894 1 15966 ensembl KNOWN DNA (CYTOSINE-5)-METHYLTRANSFERASE 3B (EC 2.1.1.37) (DNMT3B) (DNA METHYLTRANSFERASE HSAIIIB) (DNA MTASE HSAIIIB) (M.HSAIIIB). [Source:SWISSPROT;Acc:Q9UBC3] 1 0 \N
18273 protein_coding 1282 469283 31166507 31196939 1 97759 ensembl KNOWN MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 (APC-BINDING PROTEIN EB1). [Source:SWISSPROT;Acc:Q15691] 1 1 \N
18274 protein_coding 1282 469283 31210077 31225346 1 0 ensembl NOVEL \N 1 1 N
18275 protein_coding 1282 965899 10060 10405 1 0 ensembl NOVEL \N 1 1 \N
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