diff --git a/misc-scripts/regulatory_regions/load_regulatory.pl b/misc-scripts/regulatory_regions/load_regulatory.pl index fb1c7fc2dcaa1d9589eb2442df061bd28d026917..857a5b2e407a6d9f941ff46151e14f0ead484814 100755 --- a/misc-scripts/regulatory_regions/load_regulatory.pl +++ b/misc-scripts/regulatory_regions/load_regulatory.pl @@ -125,8 +125,10 @@ while (<FILE>) { # for miRNA_target (and possibly others) where individual features don't # have a unique name, create a composite one. Also set influence for each type. my $feature_name; + my $influence; if ($feature =~ /miRNA_target/i) { $feature_name = $id .":" . $seq; + $influence = "negative"; } print STDERR "No feature name for $seq of type $feature on $id.\n" if (!$feature_name); @@ -149,6 +151,7 @@ while (<FILE>) { $rr_obj_sth->execute($rr_id, $ensembl_type, $ensembl_object->dbID(), + $influence, ""); # no evidence yet $count++;