From c4fb2de428196de3169c1c886d54d3efbf174009 Mon Sep 17 00:00:00 2001
From: Monika Komorowska <mk8@sanger.ac.uk>
Date: Thu, 12 Jan 2012 11:27:13 +0000
Subject: [PATCH] set status for parser to failed if no xrefs found
---
misc-scripts/xref_mapping/XrefParser/ncRNA_DBParser.pm | 7 ++++++-
1 file changed, 6 insertions(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefParser/ncRNA_DBParser.pm b/misc-scripts/xref_mapping/XrefParser/ncRNA_DBParser.pm
index cd892319ff..3dea9d31ec 100644
--- a/misc-scripts/xref_mapping/XrefParser/ncRNA_DBParser.pm
+++ b/misc-scripts/xref_mapping/XrefParser/ncRNA_DBParser.pm
@@ -105,7 +105,12 @@ SQL
$sth->finish;
print "Added $added Xrefs for ncRNAs\n" if($verbose);
- return 0;
+
+ if ($added > 0) {
+ return 0;
+ } else {
+ return 1;
+ }
}
1;
--
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