diff --git a/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm b/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm index 6d36eedcd8a09db7e6e5c69b4136bfa70f41acb9..7b53be364b6734ec2903e39024d8a7976fdccdfb 100644 --- a/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm +++ b/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm @@ -1693,7 +1693,7 @@ PSQL print UNMAPPED_OBJECT $xref_DNA_analysis."\t"; } print UNMAPPED_OBJECT $external_db_id."\t".$accession."\t"; - print UNMAPPED_OBJECT $xref_missed_id."\t0\t0\t0\tNULL\n"; + print UNMAPPED_OBJECT $xref_missed_id."\t0\t0\t0\t\\N\n"; } } } @@ -4255,7 +4255,7 @@ PSQL print UNMAPPED_OBJECT $xref_DNA_analysis."\t"; } print UNMAPPED_OBJECT $external_db_id."\t".$acc."\t"; - print UNMAPPED_OBJECT $xref_missed_id."\t0\t0\t0\tNULL\n"; + print UNMAPPED_OBJECT $xref_missed_id."\t0\t0\t0\t\\N\n"; print XREF_P ($xref_id+$xref_id_offset) . "\t" . $external_db_id . "\t" . $acc . "\t" . $lab . "\t" . $ver . "\t" . $desc . "\tMISC\tNo match\n"; } @@ -4421,8 +4421,8 @@ SQL else{ die "COULD NOT get an analysis for source id = $master_source ".$unmapped_primary_xref{$master_xref_id}."\n"; } - print UNMAPPED_OBJECT $external_db_id."\t".$accession."\t"; - print UNMAPPED_OBJECT $xref_missed_id."\t0\t0\t0\tNULL\t". + print UNMAPPED_OBJECT $external_db_id."\t".$accession.["\t"; + print UNMAPPED_OBJECT $xref_missed_id."\t0\t0\t0\t\\N\t". $unmapped_primary_xref{$master_xref_id}. "\n"; } }