diff --git a/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm index c1f9e1505188d54f058f6efcfb032d8c10ee601b..40b3d156c41ef6fc451b557d23ec492252d4e403 100644 --- a/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/ExonAdaptor.pm @@ -92,7 +92,7 @@ sub _columns { return ( 'e.exon_id', 'e.seq_region_id', 'e.seq_region_start', 'e.seq_region_end', 'e.seq_region_strand', 'e.phase', - 'e.end_phase', 'e.is_current', ###FIXME 'e.is_constitutive', + 'e.end_phase', 'e.is_current', 'e.is_constitutive', 'esi.stable_id', 'esi.version', $created_date, $modified_date ); @@ -270,8 +270,8 @@ sub store { my $exon_sql = q{ INSERT into exon ( seq_region_id, seq_region_start, seq_region_end, seq_region_strand, phase, - end_phase, is_current ) -- FIXME , is_constitutive ) - VALUES ( ?, ?, ?, ?, ?, ?, ? ) + end_phase, is_current, is_constitutive ) + VALUES ( ?,?,?,?,?,?,?,? ) }; my $exonst = $self->prepare($exon_sql); @@ -290,7 +290,7 @@ sub store { $exonst->bind_param( 5, $exon->phase, SQL_TINYINT ); $exonst->bind_param( 6, $exon->end_phase, SQL_TINYINT ); $exonst->bind_param( 7, $is_current, SQL_TINYINT ); - ###FIXME $exonst->bind_param( 8, $is_constitutive, SQL_TINYINT ); + $exonst->bind_param( 8, $is_constitutive, SQL_TINYINT ); $exonst->execute(); $exonId = $exonst->{'mysql_insertid'}; @@ -527,7 +527,7 @@ sub _objs_from_sth { $sth->bind_columns( \$exon_id, \$seq_region_id, \$seq_region_start, \$seq_region_end, \$seq_region_strand, \$phase, - \$end_phase, \$is_current, ###FIXME \$is_constitutive, + \$end_phase, \$is_current, \$is_constitutive, \$stable_id, \$version, \$created_date, \$modified_date );