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Commit c8922497 authored by Andreas Kusalananda Kähäri's avatar Andreas Kusalananda Kähäri
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Add the OntologyDBAdaptor to the group2adaptor hash.

parent 190fd87c
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Showing with 16 additions and 17 deletions
modules/Bio/EnsEMBL/Registry.pm
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......@@ -133,23 +133,22 @@ my $API_VERSION = 55;
# This is a map from group names to Ensembl DB adaptors. Used by
# load_all() and reset_DBAdaptor().
my %group2adaptor =
(
'blast' => 'Bio::EnsEMBL::External::BlastAdaptor',
'compara' => 'Bio::EnsEMBL::Compara::DBSQL::DBAdaptor',
'core' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
'estgene' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
'funcgen' => 'Bio::EnsEMBL::Funcgen::DBSQL::DBAdaptor',
'haplotype' => 'Bio::EnsEMBL::ExternalData::Haplotype::DBAdaptor',
'hive' => 'Bio::EnsEMBL::Hive::DBSQL::DBAdaptor',
'lite' => 'Bio::EnsEMBL::Lite::DBAdaptor',
'otherfeatures' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
'pipeline' => 'Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor',
'snp' => 'Bio::EnsEMBL::ExternalData::SNPSQL::DBAdaptor',
'variation' => 'Bio::EnsEMBL::Variation::DBSQL::DBAdaptor',
'vega' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
);
my %group2adaptor = (
'blast' => 'Bio::EnsEMBL::External::BlastAdaptor',
'compara' => 'Bio::EnsEMBL::Compara::DBSQL::DBAdaptor',
'core' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
'estgene' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
'funcgen' => 'Bio::EnsEMBL::Funcgen::DBSQL::DBAdaptor',
'haplotype' => 'Bio::EnsEMBL::ExternalData::Haplotype::DBAdaptor',
'hive' => 'Bio::EnsEMBL::Hive::DBSQL::DBAdaptor',
'lite' => 'Bio::EnsEMBL::Lite::DBAdaptor',
'ontology' => 'Bio::EnsEMBL::DBSQL::OntologyDBAdaptor',
'otherfeatures' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
'pipeline' => 'Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor',
'snp' => 'Bio::EnsEMBL::ExternalData::SNPSQL::DBAdaptor',
'variation' => 'Bio::EnsEMBL::Variation::DBSQL::DBAdaptor',
'vega' => 'Bio::EnsEMBL::DBSQL::DBAdaptor',
);
=head2 load_all
......
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