Patched the Variation test-databases

modules/t/test-genome-DBs/homo_sapiens/variation/meta.txt

 1	\N	schema_type	variation
-2	\N	schema_version	85
-3	\N	patch	patch_83_84_a.sql|schema version
-4	\N	patch	patch_84_85_a.sql|schema version
-5	\N	patch	patch_84_85_b.sql|create sample_synonym
-6	\N	patch	patch_84_85_c.sql|drop column moltype from variation_synonym
-7	\N	patch	patch_85_86_d.sql|Making attrib_id auto_increment
-8	\N	patch	patch_85_86_e.sql|drop the table tagged_variation_feature
-9	\N	patch	patch_84_85_d.sql|Making attrib_id auto_increment
+2	\N	schema_version	88
+3	\N	patch	patch_84_85_a.sql|schema version
+4	\N	patch	patch_84_85_b.sql|create sample_synonym
+5	\N	patch	patch_84_85_c.sql|drop column moltype from variation_synonym
+6	\N	patch	patch_84_85_d.sql|Making attrib_id auto_increment
+7	\N	patch	patch_84_85_e.sql|drop the table tagged_variation_feature
+8	\N	patch	patch_84_85_f.sql|add phenotype_ontology_accession
+9	\N	patch	patch_84_85_g.sql|allow the column description to store more text in the source table
 10	\N	patch	patch_84_85_e.sql|drop the table tagged_variation_feature
 11	\N	patch	patch_84_85_f.sql|add phenotype_ontology_accession
 12	\N	patch	patch_84_85_g.sql|allow the column description to store more text in the source table
+13	\N	patch	patch_85_86_a.sql|schema version
+14	\N	patch	patch_85_86_b.sql|add qualifier & index to phenotype_onology_accession
+15	\N	patch	patch_85_86_c.sql|add index on study.external_reference
+16	\N	patch	patch_86_87_a.sql|schema version
+17	\N	patch	patch_87_88_a.sql|schema version
+18	\N	patch	patch_87_88_b.sql|seq_region_name_255

modules/t/test-genome-DBs/mus_musculus/variation/meta.txt

 1	\N	schema_type	variation
-2	\N	schema_version	86
+2	\N	schema_version	88
 6	1	species.production_name	mus_musculus
 15	1	web_config	sv_study#Keane 2011 (DGVa study estd118)#Keane 2011#estd118
 14	1	web_config	set#All failed variants#All failed variants#variation_set_fail_all#failed
@@ -40,3 +40,6 @@
 46	\N	patch	patch_85_86_a.sql|schema version
 47	\N	patch	patch_85_86_b.sql|add qualifier & index to phenotype_onology_accession
 48	\N	patch	patch_85_86_c.sql|add index on study.external_reference
+49	\N	patch	patch_86_87_a.sql|schema version
+50	\N	patch	patch_87_88_a.sql|schema version
+51	\N	patch	patch_87_88_b.sql|seq_region_name_255

modules/t/test-genome-DBs/mus_musculus/variation/table.sql

@@ -168,7 +168,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=49 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=52 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) NOT NULL,
@@ -385,7 +385,7 @@ CREATE TABLE `sample_synonym` (
 
 CREATE TABLE `seq_region` (
   `seq_region_id` int(10) unsigned NOT NULL,
-  `name` varchar(40) NOT NULL,
+  `name` varchar(255) NOT NULL,
   `coord_system_id` int(10) unsigned NOT NULL,
   PRIMARY KEY (`seq_region_id`),
   UNIQUE KEY `name_cs_idx` (`name`,`coord_system_id`),