diff --git a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm index c6887e3db71da6f212bd56ea89f4323b310c3c6e..f1551b84cea6081d416c7bf29d9031efa648bce9 100644 --- a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm +++ b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm @@ -463,7 +463,7 @@ sub fetch_all_by_Slice_and_external_dbname_link { push( @external_db_ids, $external_db_id ); } - if ( scalar(@external_db_id) == 0 ) { + if ( scalar(@external_db_ids) == 0 ) { warn sprintf( "Could not find external database " . "'%s' in the external_db table\n" . "Available are:\n", @@ -486,7 +486,6 @@ sub fetch_all_by_Slice_and_external_dbname_link { my %linked_genes; foreach $external_db_id (@external_db_ids) { my @linked_genes = - q $dbe_adaptor->list_gene_ids_by_external_db_id($external_db_id); foreach my $gene_id (@linked_genes) {