From cd20afd27d5d151438f4abab53da64503a46d544 Mon Sep 17 00:00:00 2001
From: Andrew Yates <ayates@ebi.ac.uk>
Date: Wed, 14 Sep 2011 13:17:50 +0000
Subject: [PATCH] Corrected mis-spelling and removed a hanging q which made its
way into the code
---
modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
index c6887e3db7..f1551b84ce 100644
--- a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
@@ -463,7 +463,7 @@ sub fetch_all_by_Slice_and_external_dbname_link {
push( @external_db_ids, $external_db_id );
}
- if ( scalar(@external_db_id) == 0 ) {
+ if ( scalar(@external_db_ids) == 0 ) {
warn sprintf( "Could not find external database "
. "'%s' in the external_db table\n"
. "Available are:\n",
@@ -486,7 +486,6 @@ sub fetch_all_by_Slice_and_external_dbname_link {
my %linked_genes;
foreach $external_db_id (@external_db_ids) {
my @linked_genes =
- q
$dbe_adaptor->list_gene_ids_by_external_db_id($external_db_id);
foreach my $gene_id (@linked_genes) {
--
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