Commit cf4d7a14 authored by Andy Yates's avatar Andy Yates
Browse files

Trying something more spectacular to avoid this horrible truncation of the file

parent 5dfa1f1e
...@@ -297,7 +297,7 @@ sub _convert_softmask_to_hardmask { ...@@ -297,7 +297,7 @@ sub _convert_softmask_to_hardmask {
$line =~ s/dna_sm/dna_rm/; $line =~ s/dna_sm/dna_rm/;
} }
else { else {
$line =~ tr/a-z/N/; $line =~ tr/[acgtn]/N/;
} }
print $hm_fh $line; print $hm_fh $line;
}; };
......
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