From d580a35274643e08c594379ba2305917d3722b71 Mon Sep 17 00:00:00 2001
From: Amonida Zadissa <amonida@ebi.ac.uk>
Date: Mon, 11 Jun 2012 08:55:57 +0000
Subject: [PATCH] Updated POD.

---
 .../canonical_transcripts/set_canonical_transcripts.pl    | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/misc-scripts/canonical_transcripts/set_canonical_transcripts.pl b/misc-scripts/canonical_transcripts/set_canonical_transcripts.pl
index bb47d39043..e75f4ad1a4 100644
--- a/misc-scripts/canonical_transcripts/set_canonical_transcripts.pl
+++ b/misc-scripts/canonical_transcripts/set_canonical_transcripts.pl
@@ -33,11 +33,11 @@
 
   -dnadbuser    DNA Database user
 
-  -ccds_dbname  CCDS database name
+  -ccdsdbname  CCDS database name
 
-  -ccds_host    CCDS database host
+  -ccdshost    CCDS database host
 
-  -ccds_user    CCDS database user
+  -ccdsuser    CCDS database user
 
 
 =head2 Other optional arguments
@@ -46,7 +46,7 @@
 
   -include_non_ref      Specify if the non_reference regions should be _excluded_. (default: include) 
 
-  -include_duplicates    Specify if the duplicate regions should be _included_. eg. Human PAR on Y (default: exclude) 
+  -include_duplicates   Specify if the duplicate regions should be _included_. eg. Human PAR on Y (default: exclude) 
 
   -seq_region_name      Chromosome name if running a single seq_region
 
-- 
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