From d8667067f3cef5048e2ce6ca0f26acd97532b13e Mon Sep 17 00:00:00 2001
From: Kieron Taylor <ktaylor@ebi.ac.uk>
Date: Tue, 8 Oct 2013 16:01:13 +0000
Subject: [PATCH] Turns out this class doesn't use Ensembl exceptions.
---
misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm b/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm
index 7baf5eac4f..13fa6bd3e3 100644
--- a/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm
@@ -524,7 +524,7 @@ sub get_alt_alleles {
}
}
if (!$ref_gene) {
- warning('Tried very hard but failed to select a representative gene for alt-allele-group '.$aag->dbID);
+ warn('Tried very hard but failed to select a representative gene for alt-allele-group '.$aag->dbID);
next;
}
$is_reference{$ref_gene} = 1;
--
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