From dbf8abc13ea47a22ad50e3a3ab894ad9bb93d85a Mon Sep 17 00:00:00 2001
From: Glenn Proctor <gp1@sanger.ac.uk>
Date: Mon, 26 Jul 2004 13:05:05 +0000
Subject: [PATCH] Now use RefSeqGPFFParser as well as the others.
---
misc-scripts/xref_mapping/BaseParser.pm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/misc-scripts/xref_mapping/BaseParser.pm b/misc-scripts/xref_mapping/BaseParser.pm
index c4f23a004e..977b3cce84 100644
--- a/misc-scripts/xref_mapping/BaseParser.pm
+++ b/misc-scripts/xref_mapping/BaseParser.pm
@@ -9,6 +9,7 @@ use POSIX qw(strftime);
use SwissProtParser;
use RefSeqParser;
+use RefSeqGPFFParser;
my $host = "ecs1g";
my $port = 3306;
@@ -178,8 +179,8 @@ sub upload_xrefs {
foreach my $syn (@{$xref->{SYNONYMS}}) {
$xref_sth->execute($syn,
- $xref->{LABEL},
- $xref->{DESCRIPTION},
+ "",
+ "",
$xref->{SOURCE_ID},
$xref->{SPECIES_ID});
--
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