diff --git a/misc-scripts/xref_mapping/XrefMapper/Methods/ExonerateGappedBest_100_perc_id.pm b/misc-scripts/xref_mapping/XrefMapper/Methods/ExonerateGappedBest_100_perc_id.pm new file mode 100644 index 0000000000000000000000000000000000000000..a93fb6599653e08cdd1bc8206c1eca10de5a3888 --- /dev/null +++ b/misc-scripts/xref_mapping/XrefMapper/Methods/ExonerateGappedBest_100_perc_id.pm @@ -0,0 +1,30 @@ +package XrefMapper::Methods::ExonerateGappedBest_100_perc_id; + +use XrefMapper::Methods::ExonerateBasic; + +use vars '@ISA'; + +@ISA = qw{XrefMapper::Methods::ExonerateBasic}; + + + +sub options { + + return ('--gappedextension FALSE', '--model', 'affine:local', '--subopt', 'no', '--bestn', '1'); + +} + +sub query_identity_threshold { + + return 100; + +} + +sub target_identity_threshold { + + return 100; + +} + + +1;