Commit ec5f8529 authored by Andy Yates's avatar Andy Yates
Browse files

Upgrading test schemas to relase 72

parent 963088d3
1 \N schema_version 71
1 \N schema_version 72
2 1 assembly.default NCBI34
33 1 species.classification Chordata
32 1 species.classification Vertebrata
......@@ -32,3 +32,5 @@
81 \N patch patch_69_70_e.sql|protein_feature_hit_description
82 \N patch patch_70_71_a.sql|schema_version
83 \N patch patch_70_71_b.sql|mapping_set_index
84 \N patch patch_71_72_a.sql|schema_version
85 \N patch patch_71_72_b.sql|associated_xref
......@@ -63,6 +63,28 @@ CREATE TABLE `assembly_exception` (
KEY `ex_idx` (`exc_seq_region_id`,`exc_seq_region_start`)
) ENGINE=MyISAM AUTO_INCREMENT=3 DEFAULT CHARSET=latin1;
CREATE TABLE `associated_group` (
`associated_group_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`description` varchar(128) DEFAULT NULL,
PRIMARY KEY (`associated_group_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
CREATE TABLE `associated_xref` (
`associated_xref_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`object_xref_id` int(10) unsigned NOT NULL DEFAULT '0',
`xref_id` int(10) unsigned NOT NULL DEFAULT '0',
`source_xref_id` int(10) unsigned DEFAULT NULL,
`condition_type` varchar(128) DEFAULT NULL,
`associated_group_id` int(10) unsigned DEFAULT NULL,
`rank` int(10) unsigned DEFAULT '0',
PRIMARY KEY (`associated_xref_id`),
UNIQUE KEY `object_associated_source_type_idx` (`object_xref_id`,`xref_id`,`source_xref_id`,`condition_type`,`associated_group_id`),
KEY `associated_source_idx` (`source_xref_id`),
KEY `associated_object_idx` (`object_xref_id`),
KEY `associated_idx` (`xref_id`),
KEY `associated_group_idx` (`associated_group_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
CREATE TABLE `attrib_type` (
`attrib_type_id` smallint(5) unsigned NOT NULL AUTO_INCREMENT,
`code` varchar(15) CHARACTER SET latin1 COLLATE latin1_bin NOT NULL DEFAULT '',
......@@ -425,7 +447,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=84 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=86 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) CHARACTER SET latin1 COLLATE latin1_bin NOT NULL DEFAULT '',
......
1 \N schema_version 71
1 \N schema_version 72
2 1 assembly.default NCBI34
33 1 species.classification Chordata
32 1 species.classification Vertebrata
......@@ -32,3 +32,5 @@
77 \N schema_type core
78 \N patch patch_70_71_a.sql|schema_version
79 \N patch patch_70_71_b.sql|mapping_set_index
80 \N patch patch_71_72_a.sql|schema_version
81 \N patch patch_71_72_b.sql|associated_xref
......@@ -63,6 +63,28 @@ CREATE TABLE `assembly_exception` (
KEY `ex_idx` (`exc_seq_region_id`,`exc_seq_region_start`)
) ENGINE=MyISAM AUTO_INCREMENT=3 DEFAULT CHARSET=latin1 COLLATE=latin1_bin;
CREATE TABLE `associated_group` (
`associated_group_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`description` varchar(128) DEFAULT NULL,
PRIMARY KEY (`associated_group_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
CREATE TABLE `associated_xref` (
`associated_xref_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`object_xref_id` int(10) unsigned NOT NULL DEFAULT '0',
`xref_id` int(10) unsigned NOT NULL DEFAULT '0',
`source_xref_id` int(10) unsigned DEFAULT NULL,
`condition_type` varchar(128) DEFAULT NULL,
`associated_group_id` int(10) unsigned DEFAULT NULL,
`rank` int(10) unsigned DEFAULT '0',
PRIMARY KEY (`associated_xref_id`),
UNIQUE KEY `object_associated_source_type_idx` (`object_xref_id`,`xref_id`,`source_xref_id`,`condition_type`,`associated_group_id`),
KEY `associated_source_idx` (`source_xref_id`),
KEY `associated_object_idx` (`object_xref_id`),
KEY `associated_idx` (`xref_id`),
KEY `associated_group_idx` (`associated_group_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
CREATE TABLE `attrib_type` (
`attrib_type_id` smallint(5) unsigned NOT NULL AUTO_INCREMENT,
`code` varchar(15) COLLATE latin1_bin NOT NULL DEFAULT '',
......@@ -426,7 +448,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=80 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=82 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',
......
1 \N schema_version 71
1 \N schema_version 72
2 1 assembly.default NCBI34
33 1 species.classification Chordata
32 1 species.classification Vertebrata
......@@ -32,3 +32,5 @@
81 \N patch patch_69_70_e.sql|protein_feature_hit_description
82 \N patch patch_70_71_a.sql|schema_version
83 \N patch patch_70_71_b.sql|mapping_set_index
84 \N patch patch_71_72_a.sql|schema_version
85 \N patch patch_71_72_b.sql|associated_xref
......@@ -63,6 +63,28 @@ CREATE TABLE `assembly_exception` (
KEY `ex_idx` (`exc_seq_region_id`,`exc_seq_region_start`)
) ENGINE=MyISAM AUTO_INCREMENT=3 DEFAULT CHARSET=latin1;
CREATE TABLE `associated_group` (
`associated_group_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`description` varchar(128) DEFAULT NULL,
PRIMARY KEY (`associated_group_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
CREATE TABLE `associated_xref` (
`associated_xref_id` int(10) unsigned NOT NULL AUTO_INCREMENT,
`object_xref_id` int(10) unsigned NOT NULL DEFAULT '0',
`xref_id` int(10) unsigned NOT NULL DEFAULT '0',
`source_xref_id` int(10) unsigned DEFAULT NULL,
`condition_type` varchar(128) DEFAULT NULL,
`associated_group_id` int(10) unsigned DEFAULT NULL,
`rank` int(10) unsigned DEFAULT '0',
PRIMARY KEY (`associated_xref_id`),
UNIQUE KEY `object_associated_source_type_idx` (`object_xref_id`,`xref_id`,`source_xref_id`,`condition_type`,`associated_group_id`),
KEY `associated_source_idx` (`source_xref_id`),
KEY `associated_object_idx` (`object_xref_id`),
KEY `associated_idx` (`xref_id`),
KEY `associated_group_idx` (`associated_group_id`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
CREATE TABLE `attrib_type` (
`attrib_type_id` smallint(5) unsigned NOT NULL AUTO_INCREMENT,
`code` varchar(15) CHARACTER SET latin1 COLLATE latin1_bin NOT NULL DEFAULT '',
......@@ -425,7 +447,7 @@ CREATE TABLE `meta` (
PRIMARY KEY (`meta_id`),
UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
KEY `species_value_idx` (`species_id`,`meta_value`)
) ENGINE=MyISAM AUTO_INCREMENT=84 DEFAULT CHARSET=latin1;
) ENGINE=MyISAM AUTO_INCREMENT=86 DEFAULT CHARSET=latin1;
CREATE TABLE `meta_coord` (
`table_name` varchar(40) CHARACTER SET latin1 COLLATE latin1_bin NOT NULL DEFAULT '',
......
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