From ee2d43094ad4afeb9753251f6181931bdcf0685e Mon Sep 17 00:00:00 2001
From: Ian Longden <ianl@sanger.ac.uk>
Date: Mon, 20 Dec 2004 11:15:49 +0000
Subject: [PATCH] fix bug that if -dumpcheck set and files not found then the
script failed instead of dumping the files
---
misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm b/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm
index b1e6c09762..9de7415327 100644
--- a/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/BasicMapper.pm
@@ -232,7 +232,6 @@ sub dump_xref{
if(defined($self->dumpcheck())){
my $skip = 1;
foreach my $list (@lists){
- $method[$i] = shift @$list;
if(!-e $xref->dir()."/xref_".$i."_dna.fasta"){
$skip = 0;
}
@@ -242,6 +241,7 @@ sub dump_xref{
$i++;
}
if($skip){
+ $method[$i] = shift @$list;
$self->method(\@method);
return;
}
--
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