From efba3fd862f1027499929eda9280716bf3c8611e Mon Sep 17 00:00:00 2001
From: Ian Longden <ianl@sanger.ac.uk>
Date: Mon, 17 Jul 2006 09:13:31 +0000
Subject: [PATCH] revert back to previous version as accidentally commited
before ready.
---
modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm | 22 ----------------------
1 file changed, 22 deletions(-)
diff --git a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
index 44a4ef6a49..618ef1d94a 100644
--- a/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
@@ -317,28 +317,6 @@ sub fetch_all_by_domain {
return $self->fetch_all_by_dbID_list(\@gene_ids);
}
-sub fetch_all_by_Slice_and_external_dbname_link {
- my $self = shift;
- my $slice = shift;
- my $logic_name = shift;
- my $load_transcripts = shift;
- my @genes_passed;
-
- #get the external_db_id from the name
-
- # get the gene_ids for those with links
-
-
- # get all the genes on the slice
-
- my $genes = $self->SUPER::fetch_all_by_Slice_constraint($slice,
- 'g.is_current = 1', $logic_name);
-
- # cretae a list of those that are in the gene_ids list
- foreach my $gene (@$genes){
- if(
- }
-}
=head2 fetch_all_by_Slice
--
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