From f564e4b8b42ddb4aee7deb34d22e76eb440f4c8c Mon Sep 17 00:00:00 2001
From: Tiago Grego <tgrego@ebi.ac.uk>
Date: Wed, 21 Feb 2018 16:28:51 +0000
Subject: [PATCH] updated documentation
---
modules/Bio/EnsEMBL/Gene.pm | 3 +++
modules/Bio/EnsEMBL/Transcript.pm | 3 +++
2 files changed, 6 insertions(+)
diff --git a/modules/Bio/EnsEMBL/Gene.pm b/modules/Bio/EnsEMBL/Gene.pm
index d42dcca9ba..4fa670d707 100755
--- a/modules/Bio/EnsEMBL/Gene.pm
+++ b/modules/Bio/EnsEMBL/Gene.pm
@@ -1516,6 +1516,9 @@ sub havana_gene {
my $biotype = $gene->biotype('protin_coding');
Description: Returns the Biotype object of this gene.
When no biotype exists, defaults to 'protein_coding'.
+ When used to set to a biotype that does not exist in
+ the biotype table, a biotype object is created with
+ the provided argument as name and object_type gene.
Returntype : Bio::EnsEMBL::Biotype
Exceptions : none
diff --git a/modules/Bio/EnsEMBL/Transcript.pm b/modules/Bio/EnsEMBL/Transcript.pm
index d50e6c1397..c1839bca75 100755
--- a/modules/Bio/EnsEMBL/Transcript.pm
+++ b/modules/Bio/EnsEMBL/Transcript.pm
@@ -3220,6 +3220,9 @@ sub get_Gene {
my $biotype = $transcript->biotype('protin_coding');
Description: Returns the Biotype object of this transcript.
When no biotype exists, defaults to 'protein_coding'.
+ When used to set to a biotype that does not exist in
+ the biotype table, a biotype object is created with
+ the provided argument as name and object_type transcript.
Returntype : Bio::EnsEMBL::Biotype
Exceptions : none
--
GitLab