From f871f1bbe008a43fb9e4a38bbc01724384eedd92 Mon Sep 17 00:00:00 2001
From: Stephen Keenan <keenan@ebi.ac.uk>
Date: Tue, 10 Jun 2003 15:43:42 +0000
Subject: [PATCH] added xref storing
---
modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm | 9 +++++++++
1 file changed, 9 insertions(+)
diff --git a/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm b/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm
index c1c97b945e..4f225c1fd3 100644
--- a/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm
+++ b/modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm
@@ -160,6 +160,14 @@ sub store {
my $transl_dbID = $sth->{'mysql_insertid'};
+
+ my $dbEntryAdaptor = $self->db()->get_DBEntryAdaptor();
+ #store each of the xrefs for this translation
+ foreach my $dbl ( @{$translation->get_all_DBLinks} ) {
+ $dbEntryAdaptor->store( $dbl, $transl_dbID, "Translation" );
+ }
+
+
if (defined($translation->stable_id)) {
if (!defined($translation->version)) {
$self->throw("Trying to store incomplete stable id information for translation");
@@ -171,6 +179,7 @@ sub store {
"'" . $translation->stable_id . "'," .
$translation->version .
")";
+
my $sth = $self->prepare($statement);
$sth->execute();
}
--
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