patched test dbs with patch_96_97_b and updated fixtures

modules/t/test-genome-DBs/mus_musculus/core/table.sql

@@ -114,6 +114,7 @@ CREATE TABLE `biotype` (
   `description` text,
   `biotype_group` enum('coding','pseudogene','snoncoding','lnoncoding','mnoncoding','LRG','undefined','no_group') DEFAULT NULL,
   `so_acc` varchar(64) DEFAULT NULL,
+  `so_term` varchar(1023) DEFAULT NULL,
   PRIMARY KEY (`biotype_id`),
   UNIQUE KEY `name_type_idx` (`name`,`object_type`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1;
@@ -489,7 +490,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=1699 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=1700 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/nameless/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Tue Feb 12 11:45:27 2019
+-- Created on Tue Feb 12 15:00:40 2019
 -- 
 
 BEGIN TRANSACTION;
@@ -142,7 +142,8 @@ CREATE TABLE "biotype" (
   "attrib_type_id" integer,
   "description" text,
   "biotype_group" enum,
-  "so_acc" varchar(64)
+  "so_acc" varchar(64),
+  "so_term" varchar(1023)
 );
 
 CREATE UNIQUE INDEX "name_type_idx" ON "biotype" ("name", "object_type");

modules/t/test-genome-DBs/nameless/core/meta.txt

@@ -105,3 +105,4 @@
 159	\N	patch	patch_94_95_c.sql|ox_key_update
 160	\N	patch	patch_95_96_a.sql|schema_version
 161	\N	patch	patch_96_97_a.sql|schema_version
+162	\N	patch	patch_96_97_b.sql|biotype_so_term

modules/t/test-genome-DBs/nameless/core/table.sql

@@ -114,6 +114,7 @@ CREATE TABLE `biotype` (
   `description` text,
   `biotype_group` enum('coding','pseudogene','snoncoding','lnoncoding','mnoncoding','LRG','undefined','no_group') DEFAULT NULL,
   `so_acc` varchar(64) DEFAULT NULL,
+  `so_term` varchar(1023) DEFAULT NULL,
   PRIMARY KEY (`biotype_id`),
   UNIQUE KEY `name_type_idx` (`name`,`object_type`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1;
@@ -479,7 +480,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=162 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=163 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/ontology/ontology/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Tue Feb 12 11:45:29 2019
+-- Created on Tue Feb 12 15:00:43 2019
 -- 
 
 BEGIN TRANSACTION;

modules/t/test-genome-DBs/polyploidy/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Tue Feb 12 11:45:32 2019
+-- Created on Tue Feb 12 15:00:46 2019
 -- 
 
 BEGIN TRANSACTION;
@@ -142,7 +142,8 @@ CREATE TABLE "biotype" (
   "attrib_type_id" integer,
   "description" text,
   "biotype_group" enum,
-  "so_acc" varchar(64)
+  "so_acc" varchar(64),
+  "so_term" varchar(1023)
 );
 
 CREATE UNIQUE INDEX "name_type_idx" ON "biotype" ("name", "object_type");

modules/t/test-genome-DBs/polyploidy/core/meta.txt

@@ -160,3 +160,4 @@
 240	\N	patch	patch_94_95_c.sql|ox_key_update
 241	\N	patch	patch_95_96_a.sql|schema_version
 242	\N	patch	patch_96_97_a.sql|schema_version
+243	\N	patch	patch_96_97_b.sql|biotype_so_term

modules/t/test-genome-DBs/polyploidy/core/table.sql

@@ -114,6 +114,7 @@ CREATE TABLE `biotype` (
   `description` text,
   `biotype_group` enum('coding','pseudogene','snoncoding','lnoncoding','mnoncoding','LRG','undefined','no_group') DEFAULT NULL,
   `so_acc` varchar(64) DEFAULT NULL,
+  `so_term` varchar(1023) DEFAULT NULL,
   PRIMARY KEY (`biotype_id`),
   UNIQUE KEY `name_type_idx` (`name`,`object_type`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1;
@@ -489,7 +490,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=243 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=244 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',

modules/t/test-genome-DBs/test_collection/core/SQLite/table.sql

 -- 
 -- Created by SQL::Translator::Producer::SQLite
--- Created on Tue Feb 12 11:45:35 2019
+-- Created on Tue Feb 12 15:00:49 2019
 -- 
 
 BEGIN TRANSACTION;
@@ -142,7 +142,8 @@ CREATE TABLE "biotype" (
   "attrib_type_id" integer,
   "description" text,
   "biotype_group" enum,
-  "so_acc" varchar(64)
+  "so_acc" varchar(64),
+  "so_term" varchar(1023)
 );
 
 CREATE UNIQUE INDEX "name_type_idx" ON "biotype" ("name", "object_type");

modules/t/test-genome-DBs/test_collection/core/meta.txt

@@ -180,3 +180,4 @@
 222	\N	patch	patch_94_95_c.sql|ox_key_update
 223	\N	patch	patch_95_96_a.sql|schema_version
 224	\N	patch	patch_96_97_a.sql|schema_version
+225	\N	patch	patch_96_97_b.sql|biotype_so_term

modules/t/test-genome-DBs/test_collection/core/table.sql

@@ -114,6 +114,7 @@ CREATE TABLE `biotype` (
   `description` text,
   `biotype_group` enum('coding','pseudogene','snoncoding','lnoncoding','mnoncoding','LRG','undefined','no_group') DEFAULT NULL,
   `so_acc` varchar(64) DEFAULT NULL,
+  `so_term` varchar(1023) DEFAULT NULL,
   PRIMARY KEY (`biotype_id`),
   UNIQUE KEY `name_type_idx` (`name`,`object_type`)
 ) ENGINE=MyISAM DEFAULT CHARSET=latin1;
@@ -479,7 +480,7 @@ CREATE TABLE `meta` (
   PRIMARY KEY (`meta_id`),
   UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`),
   KEY `species_value_idx` (`species_id`,`meta_value`)
-) ENGINE=MyISAM AUTO_INCREMENT=225 DEFAULT CHARSET=latin1;
+) ENGINE=MyISAM AUTO_INCREMENT=226 DEFAULT CHARSET=latin1;
 
 CREATE TABLE `meta_coord` (
   `table_name` varchar(40) COLLATE latin1_bin NOT NULL DEFAULT '',