From ff515ef8b6363357ce1e67e541ca2db446a98b6d Mon Sep 17 00:00:00 2001
From: Glenn Proctor <gp1@sanger.ac.uk>
Date: Mon, 4 Apr 2005 09:29:07 +0000
Subject: [PATCH] *** empty log message ***
---
.../XrefMapper/caenorhabditis_elegans.pm | 19 +++++++++++--------
1 file changed, 11 insertions(+), 8 deletions(-)
diff --git a/misc-scripts/xref_mapping/XrefMapper/caenorhabditis_elegans.pm b/misc-scripts/xref_mapping/XrefMapper/caenorhabditis_elegans.pm
index a7fe39461a..52ebfaf80e 100644
--- a/misc-scripts/xref_mapping/XrefMapper/caenorhabditis_elegans.pm
+++ b/misc-scripts/xref_mapping/XrefMapper/caenorhabditis_elegans.pm
@@ -12,15 +12,7 @@ sub get_set_lists {
}
-sub gene_description_filter_regexps {
-
- return ('[0-9A-Z]+\.\d*[A-Z]* PROTEIN[ \.]',
- '\(\d[A-Z]\d+\)\.',
- '\([0-9A-Z]+\.\d*[A-Z]* PROTEIN\)[ \.]',
- '^\(*HYPOTHETICAL\s+.*',
- '^\s*\(FRAGMENT\)\.?\s*$' );
-}
# Elegans is imported from WormBase. The gene and transcript stable IDs
# are the WormBase identifiers. The display_xref_ids for genes and
@@ -61,4 +53,15 @@ sub build_gene_display_xrefs {
}
+
+sub gene_description_filter_regexps {
+
+ return ('[0-9A-Z]+\.\d*[A-Z]* PROTEIN[ \.]',
+ '\(\d[A-Z]\d+\)\.',
+ '\([0-9A-Z]+\.\d*[A-Z]* PROTEIN\)[ \.]',
+ '^\(*HYPOTHETICAL\s+.*',
+ '^\s*\(FRAGMENT\)\.?\s*$' );
+
+}
+
1;
--
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