Commits · 01ed883b55f8c705f8d2a1183121e94a1ffaef0a · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Feb 09, 2023.

22 Sep, 2006 4 commits
- Make fetch_all_by_hit_name_unversioned consider the . in the name. · 01ed883b
  Glenn Proctor authored Sep 22, 2006
  
  01ed883b
- Check adaptor is there before using it. · a56041e0
  Glenn Proctor authored Sep 22, 2006
  
  a56041e0
- get_all_synonyms now lazy-loads synonyms if required. · 330c5b5a
  Glenn Proctor authored Sep 22, 2006
  
  330c5b5a
- Added fetch_all_synonyms to allow lazy-loading of synonyms in DBEntry. · 785213d3
  Glenn Proctor authored Sep 22, 2006
  
  785213d3
21 Sep, 2006 3 commits
- ucfirst species names in info_text · 89289606
  Glenn Proctor authored Sep 21, 2006
  
  89289606
- Changed display label of RGD to RGD Symbol. · 01aa0530
  Glenn Proctor authored Sep 21, 2006
  
  01aa0530
- Corrected perldoc (example wasn't using a listref) · 24f1d52a
  Glenn Proctor authored Sep 21, 2006
  
  24f1d52a
20 Sep, 2006 2 commits
- reverted · 1ab34ae0
  Felix Kokocinski authored Sep 20, 2006
  
  1ab34ae0
- bugtweak · 201cea30
  Felix Kokocinski authored Sep 20, 2006
  
  201cea30
19 Sep, 2006 2 commits
- clarification to documentation for fetch_all() · f80791f1
  Patrick Meidl authored Sep 19, 2006
  
  f80791f1
- Delete old features before recalculating. · 62792d25
  Glenn Proctor authored Sep 19, 2006
  
  62792d25
18 Sep, 2006 1 commit
- Changed method to ENSEMBL_ORTHOLOGUES · dbfb6817
  Glenn Proctor authored Sep 18, 2006
  
  dbfb6817
15 Sep, 2006 4 commits
- fix to stop descriptions for some hgnc identifiers not being copied · 381da0d3
  Ian Longden authored Sep 15, 2006
  
  381da0d3
- modified modules using StrainSlice to handle new database schema · 35c77d47
  Daniel Rios authored Sep 15, 2006
  
  35c77d47
- needs feature_Slice->project to work · a4b8b7ed
  Felix Kokocinski authored Sep 15, 2006
  
  a4b8b7ed
- Convert cigar line read from exonerate to format 439M after reading. · 97be74eb
  Glenn Proctor authored Sep 15, 2006
  
  97be74eb
14 Sep, 2006 4 commits

New prioritys can be used with xrefs to allow one source to have many... · e251f3b6

Ian Longden authored Sep 14, 2006

New prioritys can be used with xrefs to allow one source to have many different inputs each having a different priority. Also gene descriptions etc are not just based on the mapping done but on all those in the object_xref tables etc, so it is also possible to just recalc descriptions or display xrefs

e251f3b6

removed refseq predicted and genoscope predicted from list · 95e6bc02
Ian Longden authored Sep 14, 2006

95e6bc02

added prioritys to the xref sources. This is the priority that they have for... · 3f0b5634

Ian Longden authored Sep 14, 2006

added prioritys to the xref sources. This is the priority that they have for each accession for a particular source. This id completely different to the order.

3f0b5634

New HUGO parsers · 5ff8b912
Ian Longden authored Sep 14, 2006

5ff8b912

13 Sep, 2006 5 commits
- Improved Perldoc. · 566ce6a3
  Glenn Proctor authored Sep 13, 2006
  
  566ce6a3
- Added fetch_all_by_hit_name_unversioned. · 25ce5eb3
  Glenn Proctor authored Sep 13, 2006
  
  25ce5eb3
- Fixed Perldoc · d244ea8a
  Glenn Proctor authored Sep 13, 2006
  
  d244ea8a
- a few words about the config file · 8a91eff0
  Felix Kokocinski authored Sep 13, 2006
  
  8a91eff0
- select next highest rank number to allow multiple mappings in one database · edf46918
  Felix Kokocinski authored Sep 13, 2006
  
  edf46918
12 Sep, 2006 4 commits
- Added extra indices to *_attrib tables to improve performance of certain queries. · e8abdcae
  Glenn Proctor authored Sep 12, 2006
  
  e8abdcae
- New version · c3d22365
  Glenn Proctor authored Sep 12, 2006
  
  c3d22365
- removed old patch entries to meta table · 5847eb72
  Patrick Meidl authored Sep 12, 2006
  
  5847eb72
- Clean up existing attributes for gene counts before starting to prevent multiple entries. · b59d7f57
  Glenn Proctor authored Sep 12, 2006
  
  b59d7f57
11 Sep, 2006 1 commit
- minor clarification to documentation · d600a296
  Patrick Meidl authored Sep 11, 2006
  
  d600a296
07 Sep, 2006 6 commits
- Fixed so that only the <member_list> section of each entry is used to · c16ecc90
  Kevin Howe authored Sep 07, 2006
```
make interpro->other_db map
```
  c16ecc90
- Added ens-genomics1 and 2 · 515726e4
  Abel Ureta-Vidal authored Sep 07, 2006
  
  515726e4
- Added compara2 · a3618828
  Abel Ureta-Vidal authored Sep 07, 2006
  
  a3618828
- Added SMART and PIRSF · 035a3a68
  Kevin Howe authored Sep 07, 2006
  
  035a3a68
- Fixed execution checking glitch · 8e4f21d0
  Abel Ureta-Vidal authored Sep 07, 2006
  
  8e4f21d0
- Moved from Arne's personal area · 9b478164
  Glenn Proctor authored Sep 07, 2006
  
  9b478164
06 Sep, 2006 4 commits
- added latest servers (mart2,genebuild4/5/6) · d0ebd887
  Benoit Ballester authored Sep 06, 2006
  
  d0ebd887
- Fixed string susbtitution regexp · ff182898
  Abel Ureta-Vidal authored Sep 06, 2006
  
  ff182898
- Update schema_version in meta table · 0647cfeb
  Glenn Proctor authored Sep 06, 2006
  
  0647cfeb
- Prevent error message if no arguments are given. · 6028fe61
  Glenn Proctor authored Sep 06, 2006
  
  6028fe61