This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated .
  1. 07 Jun, 2006 1 commit
  2. 31 May, 2006 1 commit
  3. 10 May, 2006 1 commit
  4. 04 May, 2006 2 commits
  5. 03 May, 2006 1 commit
  6. 02 May, 2006 1 commit
    • cvs2git's avatar
      This commit was manufactured by cvs2svn to create branch · c093ff70
      cvs2git authored
      'mapper_unique_cache_fix_branch'.
      
      Sprout from master 2006-04-28 13:48:29 UTC Will Spooner <whs@sanger.ac.uk> 'Mapper that runs exonerate jobs using PBS rather than LSF'
      Cherrypick from master 2006-05-02 12:40:22 UTC Patrick Meidl <pm2@sanger.ac.uk> 'changes to DBEntryAdaptor->store() and AttributeAdaptor->store()':
          modules/Bio/EnsEMBL/DBSQL/AttributeAdaptor.pm
          modules/Bio/EnsEMBL/DBSQL/DBEntryAdaptor.pm
          modules/Bio/EnsEMBL/DBSQL/GeneAdaptor.pm
          modules/Bio/EnsEMBL/DBSQL/TranscriptAdaptor.pm
          modules/Bio/EnsEMBL/DBSQL/TranslationAdaptor.pm
      Delete:
          misc-scripts/archive/fake_stable_id_mapping.pl
          misc-scripts/assembly/AssemblyMapper/BlastzAligner.pm
          misc-scripts/assembly/align_by_clone_identity.pl
          misc-scripts/assembly/align_nonident_regions.pl
          misc-scripts/assembly/blastz_matrix.txt
          misc-scripts/assembly/load_alternative_assembly.pl
          misc-scripts/protein_match/process_pmach.pl
          misc-scripts/xref_projection/project_display_xrefs.pl
          misc-scripts/xref_projection/release_37.conf
          misc-scripts/xref_projection/release_38.conf
          modules/Bio/EnsEMBL/DBSQL/Clone.pm
          modules/t/newtransfer.t
      c093ff70
  7. 28 Apr, 2006 1 commit
  8. 27 Apr, 2006 1 commit
  9. 13 Apr, 2006 2 commits
    • Ian Longden's avatar
      adaptor added · bcdad8a3
      Ian Longden authored
      bcdad8a3
    • Anne Parker's avatar
      · 217152d4
      Anne Parker authored
      Fixed typo in fetch_all_byProbe [ db() -> dbID() ]
      217152d4
  10. 11 Apr, 2006 3 commits
  11. 10 Apr, 2006 1 commit
  12. 06 Apr, 2006 3 commits
  13. 05 Apr, 2006 1 commit
  14. 28 Mar, 2006 1 commit
  15. 24 Mar, 2006 1 commit
  16. 23 Mar, 2006 1 commit
  17. 21 Mar, 2006 2 commits
  18. 10 Mar, 2006 2 commits
  19. 09 Mar, 2006 2 commits
  20. 06 Mar, 2006 1 commit
    • Ian Sealy's avatar
      Affy -> Oligo schema and API changes. · d1187a3c
      Ian Sealy authored
      Can now support oligonucleotide microarrays other than Affy.
      The three affy_* tables are changed to oligo_* tables. New fields are:
        oligo_array.type (currently either AFFY or OLIGO)
        oligo_probe.length
        oligo_probe.description
      The existing Affy objects become subclasses of new Oligo objects, but
      the API is backwards compatible, so existing pipeline and Web code won't
      need changing.
      d1187a3c
  21. 27 Feb, 2006 1 commit
  22. 23 Feb, 2006 7 commits
  23. 22 Feb, 2006 1 commit
  24. 21 Feb, 2006 2 commits