Commits · 349f1c4b67ca0a6fdd1ef6d9ea9de8a822e6c6b0 · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Jan 29, 2023.

02 Jan, 2007 4 commits
- added order as an optional argument to list_dbIDs, mosy useful for genes and... · 349f1c4b
  Ian Longden authored Jan 02, 2007
```
added order as an optional argument to list_dbIDs, mosy useful for genes and transcripts so caching is maximised
```
  349f1c4b
- fixed wrong data examples · e1acca24
  Ian Longden authored Jan 02, 2007
  
  e1acca24
- Fix number of tests. · b0fe440c
  Glenn Proctor authored Jan 02, 2007
  
  b0fe440c
- miRNA_Registry split into twp seperate sources now of miRBase and miRBase_predicted · f3b5bd0e
  Ian Longden authored Jan 02, 2007
  
  f3b5bd0e
21 Dec, 2006 3 commits
- made compatible for new and old formats · 5a079000
  Ian Longden authored Dec 21, 2006
  
  5a079000
- anoying print statement removed · 79ce5b95
  Ian Longden authored Dec 21, 2006
  
  79ce5b95
- added ncRNA entrys for alot of species · 360aff09
  Ian Longden authored Dec 21, 2006
  
  360aff09
20 Dec, 2006 3 commits
- change in description for the master/parent xref not mapped message · f050869e
  Ian Longden authored Dec 20, 2006
  
  f050869e
- Entrezgene is parsed seperately now aswell to get all the descriptions and synonyms · 41ed4ec5
  Ian Longden authored Dec 20, 2006
  
  41ed4ec5
- Add biotype to comparison. · 2cc78138
  Glenn Proctor authored Dec 20, 2006
  
  2cc78138
19 Dec, 2006 6 commits
- SGD stuff for yeast added · 1d06c3ed
  Ian Longden authored Dec 19, 2006
  
  1d06c3ed
- new reason added · c1325273
  Ian Longden authored Dec 19, 2006
  
  c1325273
- Now delete old features before starting to avoid creating duplicates. · dafa90c8
  Glenn Proctor authored Dec 19, 2006
  
  dafa90c8
- Now delete old features before starting to avoid creating duplicates. · 2e6c1646
  Glenn Proctor authored Dec 19, 2006
  
  2e6c1646
- Remove unnecessary ; · 467a70b4
  Glenn Proctor authored Dec 19, 2006
  
  467a70b4
- Don't calculate or store small (1000 bp) block size as this isn't used by the... · 687e9fc9
  Glenn Proctor authored Dec 19, 2006
```
Don't calculate or store small (1000 bp) block size as this isn't used by the web code or anywhere else.
```
  687e9fc9
18 Dec, 2006 8 commits
- added dependent unmapped_objects · 7f70714d
  Ian Longden authored Dec 18, 2006
  
  7f70714d
- use EntrezGene as a valid source too · fb8c0639
  Ian Longden authored Dec 18, 2006
  
  fb8c0639
- keep acount of those missed · 87639501
  Ian Longden authored Dec 18, 2006
  
  87639501
- added SGD parsing for yeast · e93b9dcc
  Ian Longden authored Dec 18, 2006
  
  e93b9dcc
- small note on EntrezGenees · 087edfaf
  Ian Longden authored Dec 18, 2006
  
  087edfaf
- added parent to the unmapped_object table to allow adding what the parent was... · 77096256
  Ian Longden authored Dec 18, 2006
```
added parent to the unmapped_object table to allow adding what the parent was for depenednet xrefs etc
```
  77096256
- EntrezGene loaded from ncbi to get synonyms etc · edded9db
  Ian Longden authored Dec 18, 2006
  
  edded9db
- docs added · 6dcc2fa9
  Ian Longden authored Dec 18, 2006
  
  6dcc2fa9
16 Dec, 2006 1 commit
- minor optimisation · be858c1a
  Web Admin authored Dec 16, 2006
  
  be858c1a
15 Dec, 2006 2 commits
- documentation · 7226a208
  Ian Longden authored Dec 15, 2006
  
  7226a208
- changed multi/martview to biomart/martview · 81933b85
  Fiona Cunningham authored Dec 15, 2006
  
  81933b85
13 Dec, 2006 4 commits
- commited it by mistake · 756460ea
  Fiona Cunningham authored Dec 13, 2006
  
  756460ea
- fixed bug in consequence type calculation · c8a04d40
  Fiona Cunningham authored Dec 13, 2006
  
  c8a04d40
- Do UTR strand check properly · 0c69394d
  Glenn Proctor authored Dec 13, 2006
  
  0c69394d
- Added species as an additional field. · 25d993ac
  Glenn Proctor authored Dec 13, 2006
  
  25d993ac
12 Dec, 2006 1 commit
- Restrict comparison by array (one only). · c60edea5
  Glenn Proctor authored Dec 12, 2006
```
Make target connection details default to source if not specified.
```
  c60edea5
08 Dec, 2006 2 commits
- removed test prints. · 190d7ce4
  Ian Longden authored Dec 08, 2006
  
  190d7ce4
- fix to skipdownload and checkdownload options · eb9a6fa9
  Ian Longden authored Dec 08, 2006
  
  eb9a6fa9
07 Dec, 2006 3 commits
- Allow configuration of mapping threshold · 095b6ffd
  Glenn Proctor authored Dec 07, 2006
  
  095b6ffd
- Re-did mapping; log probesets that don't map to any transcripts; no longer ignore strand · e42e468f
  Glenn Proctor authored Dec 07, 2006
  
  e42e468f
- modified to return SARA with het alleles · 4f50a488
  Daniel Rios authored Dec 07, 2006
  
  4f50a488
06 Dec, 2006 3 commits
- modified the / separator to | · 6b1f7ece
  Daniel Rios authored Dec 06, 2006
  
  6b1f7ece
- modified the / separator to | · 57a8b528
  Daniel Rios authored Dec 06, 2006
  
  57a8b528
- modified to use get_all_AlleleFeatures_Slice instead of get_all_differences_Slice · f0656809
  Daniel Rios authored Dec 06, 2006
  
  f0656809