Commits · 720ae45dbc5e6c59b3dacd015e8313eb1c2eca15 · ensembl-gh-mirror / ensembl · GitLab

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Jan 29, 2023.

09 Mar, 2009 5 commits
- analysis moved onto object_xref from identity_xref, so API modified to look at corect tables etc · 720ae45d
  Ian Longden authored Mar 09, 2009
  
  720ae45d
- analysis moved onto object_xref from identity_xref · 35699be1
  Ian Longden authored Mar 09, 2009
  
  35699be1
- 11 other drosophila species scripts add for x-refs mapping. · 8a1481f6
  Gautier Koscielny authored Mar 09, 2009
  
  8a1481f6
- Code modified to return an array of filenames in method 'build_transcript_and_gene_display_xrefs'. · 7930b3f6
  Gautier Koscielny authored Mar 09, 2009
  
  7930b3f6
- new script to ensure the web_data column can be evaluated into a hash · e7686f3e
  Daniel Rios authored Mar 09, 2009
  
  e7686f3e
06 Mar, 2009 4 commits
- verbose added · ddd666c9
  Ian Longden authored Mar 06, 2009
  
  ddd666c9
- verbosity added plus updating process_status table · f33bf36b
  Ian Longden authored Mar 06, 2009
  
  f33bf36b
- verbose option added and bug fix for official name synonyms · f3bfb6ec
  Ian Longden authored Mar 06, 2009
  
  f3bfb6ec
- verbose option added · 2a61cff6
  Ian Longden authored Mar 06, 2009
  
  2a61cff6
05 Mar, 2009 6 commits
- removed starts_met and has_stop codon from the calculation, not needed any more · a36dca51
  Daniel Rios authored Mar 05, 2009
  
  a36dca51
- Added sub get_species_id_from_species_name · fbf5ff92
  Ian Longden authored Mar 05, 2009
  
  fbf5ff92
- Formatting. · 9b8fe3b1
  Andreas Kusalananda Kähäri authored Mar 05, 2009
  
  9b8fe3b1
- oly do uploading/coordinate xrefs if upload is true · 59895f07
  Ian Longden authored Mar 05, 2009
  
  59895f07
- added new sunroutine to make calling etc similar to other modules · 53d01a05
  Ian Longden authored Mar 05, 2009
  
  53d01a05
- dinsuh sql query · 678db52f
  Ian Longden authored Mar 05, 2009
  
  678db52f
04 Mar, 2009 24 commits
- total rewrite · 9806f5fc
  Ian Longden authored Mar 04, 2009
  
  9806f5fc
- add interpro table data · c518fe9a
  Ian Longden authored Mar 04, 2009
  
  c518fe9a
- WikiGene added plus some moving around of sources and there prioritys · 4efc9876
  Ian Longden authored Mar 04, 2009
  
  4efc9876
- pretty much a total rewrite as we now store the object xref etc inside the xref database now · 614e37f0
  Ian Longden authored Mar 04, 2009
  
  614e37f0
- added getting hgnc aliases and info_type addition to xref table · 38c6e56b
  Ian Longden authored Mar 04, 2009
  
  38c6e56b
- removed default setting as these will be continually incorrect (i.e. for the previous release) · 282abd4f
  Ian Longden authored Mar 04, 2009
  
  282abd4f
- added info_type to xref creation. Not sure if this parser is used anymore though · 3c8b330c
  Ian Longden authored Mar 04, 2009
  
  3c8b330c
- add aliases from previous hgncs · 144d583f
  Ian Longden authored Mar 04, 2009
  
  144d583f
- add aliases for hgnc even if we cannot map them · 6c0455e0
  Ian Longden authored Mar 04, 2009
  
  6c0455e0
- added info_type to xref creation · 71afe302
  Ian Longden authored Mar 04, 2009
  
  71afe302
- write statuses to databases · ebd842f5
  Ian Longden authored Mar 04, 2009
  
  ebd842f5
- test for valid stable ids · c5ba8f48
  Ian Longden authored Mar 04, 2009
  
  c5ba8f48
- finish sql instances to stop dropped connections · c04ec7e5
  Ian Longden authored Mar 04, 2009
  
  c04ec7e5
- lots of bug fixes · d818ffde
  Ian Longden authored Mar 04, 2009
  
  d818ffde
- remove undefined error message if no object_xrefs are already there · 50e9e685
  Ian Longden authored Mar 04, 2009
  
  50e9e685
- Load unmapped data aswell to the core database · 24b565eb
  Ian Longden authored Mar 04, 2009
  
  24b565eb
- added get_official_name · d75f5a97
  Ian Longden authored Mar 04, 2009
  
  d75f5a97
- calculation of displat_xrefs and descriptions · 779b6b9d
  Ian Longden authored Mar 04, 2009
  
  779b6b9d
- totally new · 71cce460
  Ian Longden authored Mar 04, 2009
  
  71cce460
- removed 2 attributes for the translation_attrib not used anymore · df34f7f0
  Daniel Rios authored Mar 04, 2009
  
  df34f7f0
- Remove initial blanks from NAME section lines. · 359c3ec4
  Andreas Kusalananda Kähäri authored Mar 04, 2009
  
  359c3ec4
- Streamline LICENSE, CONTACT, and AUTHOR sections in POD. · 188692f6
  Andreas Kusalananda Kähäri authored Mar 04, 2009
```
Formatting of SYNOPSIS code.

Passes unit tests.
```
  188692f6
- Beautify. · 2edc352e
  Andreas Kusalananda Kähäri authored Mar 04, 2009
  
  2edc352e
- Improve. · be4dc6c4
  Andreas Kusalananda Kähäri authored Mar 04, 2009
  
  be4dc6c4
03 Mar, 2009 1 commit
- Fixed bug in get_all_Slices() causing indel positions to be overwritten · 01b3b7dc
  William McLaren authored Mar 03, 2009
  
  01b3b7dc