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It should be seq_region_start and seq_region_end for UTRs, since start/end now are relative to the feature, as with other feature types

Because of a fix of a very old bug in the mapper, some Exon features if they're made via a Slice have start() and end() relative to the feature. So in genomic2cdna calls we were using $self->start() and $self->end(), this means we were sometimes using incorrect coordinates. Change to seq_reion_start and seq_region_end

bugfix: get_all_DBAdaptors() should return an empty list if the species name (alias) does not exist

Tweak to gene description filters

Support for multi letter patches

- Fix how UTRs are created, they should be created with start/end rel…

- Fix how UTRs are created, they should be created with start/end relative to the feature, not in genomic coordinates
- Update tests to check UTRs are created correctly when transcripts are fetched from a Slice
- UTR test cases for forward and reverse strand transcripts

Changes to gtf serializer to deal with offset in codon and utr reginos

biotype defaults to protein_coding if non provided

[ENSCORESW-1724] Stop users fetching slices by regions with <empty string> as the end coordinate. Bug allowed unbound slices.

Corrected copyright updater to deal with multi format licenses

This reverts commit 3e24194c.

Update TranscriptSelector.pm with new biotypes