Commits · 7e646b02bcf5d145658f3731b17390abffa48128 · ensembl-gh-mirror / ensembl · GitLab

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Jan 31, 2023.

01 Mar, 2004 33 commits
- removed seq_region_attrib functions now present on AttributeAdaptor instead · 7e646b02
  Graham McVicker authored Mar 01, 2004
  
  7e646b02
- removed tests for attrib functions which have been moved to AttributeAdaptor from SliceAdaptor · 8b27ca5d
  Graham McVicker authored Mar 01, 2004
  
  8b27ca5d
- set_seq_region_attrib is gone, use store_on_Slice in AttributeAdaptor now · dbbb6663
  Arne Stabenau authored Mar 01, 2004
  
  dbbb6663
- fixed some warnings/test errors · 5f2e184a
  Graham McVicker authored Mar 01, 2004
  
  5f2e184a
- made attrib_type.description optional · 82d2335b
  Arne Stabenau authored Mar 01, 2004
  
  82d2335b
- fixed test count · b096923c
  Graham McVicker authored Mar 01, 2004
  
  b096923c
- fixed attribute testing · 3e13b687
  Arne Stabenau authored Mar 01, 2004
  
  3e13b687
- removed since broken, can be readded later · cda3b3dc
  Graham McVicker authored Mar 01, 2004
  
  cda3b3dc
- corrected store method · c278f330
  Graham McVicker authored Mar 01, 2004
  
  c278f330
- desc -> description · 8df7b8dc
  Graham McVicker authored Mar 01, 2004
  
  8df7b8dc
- updated PODs · dcbea868
  Graham McVicker authored Mar 01, 2004
  
  dcbea868
- avoid a couple of perl warnings · ed8911ac
  Graham McVicker authored Mar 01, 2004
  
  ed8911ac
- removed not null from attrib_type.description · 2d0126d1
  Arne Stabenau authored Mar 01, 2004
  
  2d0126d1
- desc -> description · 64d9f04f
  Graham McVicker authored Mar 01, 2004
  
  64d9f04f
- added tests for store method · 578fb61a
  Graham McVicker authored Mar 01, 2004
  
  578fb61a
- The preload configured database is now automatically created if it doesnt exist on test host · 9f31585a
  Arne Stabenau authored Mar 01, 2004
  
  9f31585a
- fixed errors in the store method · cfca09e6
  Graham McVicker authored Mar 01, 2004
  
  cfca09e6
- added tests related to storing of MiscSets · b4ef6a5f
  Graham McVicker authored Mar 01, 2004
  
  b4ef6a5f
- changed test to use description() instead of desc() method · a2613ef8
  Graham McVicker authored Mar 01, 2004
  
  a2613ef8
- adapt the test to new Attribute API · fc27c1a5
  Arne Stabenau authored Mar 01, 2004
  
  fc27c1a5
- bug fix · 84050f6e
  Arne Stabenau authored Mar 01, 2004
  
  84050f6e
- added forgotten "use" of rearrange method · 8e011446
  Graham McVicker authored Mar 01, 2004
  
  8e011446
- fixed typo in test · e106c96d
  Graham McVicker authored Mar 01, 2004
  
  e106c96d
- renamed desc attribute to description to be more consistant with DB and MiscSet module · 3c8eae8f
  Graham McVicker authored Mar 01, 2004
  
  3c8eae8f
- changed constructor to take named arguments · 4083c871
  Graham McVicker authored Mar 01, 2004
  
  4083c871
- added store methods · 25abadb2
  Graham McVicker authored Mar 01, 2004
  
  25abadb2
- small changes in API related to Attributes · bee31908
  Arne Stabenau authored Mar 01, 2004
  
  bee31908
- added get_AttributeAdaptor method · b3ec19cd
  Graham McVicker authored Mar 01, 2004
  
  b3ec19cd
- finished AttributeAdaptor implementation · ea37ea6f
  Graham McVicker authored Mar 01, 2004
  
  ea37ea6f
- corrected test count · 57bffab9
  Graham McVicker authored Mar 01, 2004
  
  57bffab9
- added tests for new AttributeAdaptor · b2d50053
  Graham McVicker authored Mar 01, 2004
  
  b2d50053
- updated POD · 16231d85
  Graham McVicker authored Mar 01, 2004
  
  16231d85
- removed restrict_between_positions method, confusing and apparently never used · be4ca9d3
  Graham McVicker authored Mar 01, 2004
  
  be4ca9d3
28 Feb, 2004 2 commits
- fixed a couple more deletion bugs, took out some debug prints, added a couple of status codes · c109b883
  Graham McVicker authored Feb 28, 2004
  
  c109b883
- fixed a couple of bugs in deletion processing code · f18197d2
  Graham McVicker authored Feb 28, 2004
  
  f18197d2
27 Feb, 2004 5 commits
- more work on AttributeAdaptor, still incomplete · cc91660c
  Graham McVicker authored Feb 27, 2004
  
  cc91660c
- Created new Bio::EnsEMBL::Attribute class · 227ae696
  Graham McVicker authored Feb 27, 2004
  
  227ae696
- added tests for Attribute class · 2edcd70f
  Graham McVicker authored Feb 27, 2004
  
  2edcd70f
- initial AttributeAdaptor. Used by Slice and SliceAdaptor to store Attribute... · 6882d903
  Arne Stabenau authored Feb 27, 2004
```
initial AttributeAdaptor. Used by Slice and SliceAdaptor to store Attribute objects. Used by MiscFeature and MiscFeatureAdaptor as well
```
  6882d903
- * made Slice::project more efficient by removing a fetch of entire slice (no... · c4f85ffc
  Graham McVicker authored Feb 27, 2004
```
* made Slice::project more efficient by removing a fetch of entire slice (no longer needed b/c of seq_region_length attrib on slice)
* added use Bio::EnsEMBL::ProjectionSegment statement
```
  c4f85ffc