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  23. 30 Aug, 2007 1 commit
  24. 16 Aug, 2007 1 commit
    • Andreas Kusalananda Kähäri's avatar
      Change to the store() method: · 9cdfca6f
      Andreas Kusalananda Kähäri authored
        Add an optional fourth boolean argument, $ignore_release:
      
          If unset or zero, will require that the release string of the
          DBEntry object is identical to the release of the external database.
          If set and non-zero, will ignore the release information.
      9cdfca6f
  25. 27 Jul, 2007 1 commit
  26. 05 Jul, 2007 1 commit
  27. 21 Jun, 2007 1 commit
    • Andreas Kusalananda Kähäri's avatar
      Added new optional argument $external_db_name to · ac52bc8e
      Andreas Kusalananda Kähäri authored
      fetch_all_by_external_name() in GeneAdaptor.pm, TranscriptAdaptor.pm,
      and in TranslationAdaptor.pm.
      
      This will limit the returned genes, transcripts, or translations, to
      those that originates from the named external database.
      
      This also means adding the optional argument to
      list_gene_ids_by_extids(), list_transcript_ids_by_extids(),
      list_translation_ids_by_extids(), and to _type_by_external_id() in
      DBEntryAdaptor.pm.
      
      The matching is done on 'db_name' in the 'external_db' table with LIKE
      and an appended '%' to the given $external_db_name.
      ac52bc8e
  28. 05 Jun, 2007 1 commit
  29. 30 May, 2007 1 commit
  30. 16 Apr, 2007 1 commit
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  38. 19 Jul, 2006 1 commit
  39. 17 Jul, 2006 1 commit