Commits · 9624802fb4d5d644540b7ae9e38e2236caf04951 · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Jan 30, 2023.

20 Nov, 2002 10 commits
- removed some uneeded 'uses', removed uneeded sleep · 9624802f
  Graham McVicker authored Nov 20, 2002
  
  9624802f
- added container.t test script · db3e88c7
  Graham McVicker authored Nov 20, 2002
  
  db3e88c7
- changed a comma for a semicolon at the end of two lines · 8539013a
  Eduardo Eyras authored Nov 20, 2002
  
  8539013a
- added chromosome.t test script · 135915f2
  Graham McVicker authored Nov 20, 2002
  
  135915f2
- The first few tests.... wip · 5329173c
  Alistair Rust authored Nov 20, 2002
  
  5329173c
- Wrapper around Ewan's scanwisepep may replace pmatch at some point for the... · 623fcec5
  Emmanuel Mongin authored Nov 20, 2002
```
Wrapper around Ewan's scanwisepep may replace pmatch at some point for the known gene mapping but still need some debugging
```
  623fcec5
- some comments · ddf4d985
  Arne Stabenau authored Nov 20, 2002
  
  ddf4d985
- · de480bef
  Laura Clarke authored Nov 20, 2002
```
first set of files for parsing wormbase into ensembl

these mostly work but aren't fully tested

they work in theory but but i am still having problems getting the correct sequence
```
  de480bef
- updated dbConnection.t test script · d21421f3
  Graham McVicker authored Nov 20, 2002
  
  d21421f3
- commented out debugging print · 17f270cd
  Eduardo Eyras authored Nov 20, 2002
  
  17f270cd
19 Nov, 2002 13 commits
- some deprecated warnings · 62224abf
  Arne Stabenau authored Nov 19, 2002
  
  62224abf
- DBConnection bug (port + driver not set by constructor) fix · 959c15f0
  Graham McVicker authored Nov 19, 2002
  
  959c15f0
- added dbConnection.t test script, one test still fails · 8ed06d52
  Graham McVicker authored Nov 19, 2002
  
  8ed06d52
- lots to do, just cleaned up now · 4e0d0cb2
  Arne Stabenau authored Nov 19, 2002
  
  4e0d0cb2
- calls made in geneview web script · 49c8f2d6
  Arne Stabenau authored Nov 19, 2002
  
  49c8f2d6
- moretests · b660ddd6
  Arne Stabenau authored Nov 19, 2002
  
  b660ddd6
- Updated PODs · a2f48ed7
  Graham McVicker authored Nov 19, 2002
  
  a2f48ed7
- removed warning in gene test script · 828cb84e
  Graham McVicker authored Nov 19, 2002
  
  828cb84e
- added sliceAdaptor.t test script · c6637410
  Graham McVicker authored Nov 19, 2002
  
  c6637410
- verbose flag in debug method is ::verbose for global variable · e280c439
  Arne Stabenau authored Nov 19, 2002
  
  e280c439
- Removed parameter checking regexps · 3e6de505
  Web Admin authored Nov 19, 2002
  
  3e6de505
- all genes were known bug fixed · 351f862a
  Arne Stabenau authored Nov 19, 2002
  
  351f862a
- Merged changes from the branch · 1fe1c7f7
  Arne Stabenau authored Nov 19, 2002
  
  1fe1c7f7
18 Nov, 2002 3 commits
- sequence cache has to be flushed on creating of a modfied exon · 7d8060c5
  Arne Stabenau authored Nov 18, 2002
  
  7d8060c5
- added use of 'strict' and 'warnings' pragmas to some tests · 64d2539f
  Graham McVicker authored Nov 18, 2002
  
  64d2539f
- Added TestUtils module with a single class method test_getter_setter · 982e4f34
  Graham McVicker authored Nov 18, 2002
```
updated predictionTranscript test to use new module
```
  982e4f34
15 Nov, 2002 8 commits
- PODs, removed debug statements, renamed flush_Exon flush_Exons · 007766bc
  Graham McVicker authored Nov 15, 2002
  
  007766bc
- updated prediction transcript test script · f31cdf7b
  Graham McVicker authored Nov 15, 2002
  
  f31cdf7b
- finished cleanup, tests work · 19d14ffa
  Arne Stabenau authored Nov 15, 2002
  
  19d14ffa
- clean up, not enough test yet · 30c90c5f
  Arne Stabenau authored Nov 15, 2002
  
  30c90c5f
- some cleanup · 1fe9d658
  Arne Stabenau authored Nov 15, 2002
  
  1fe9d658
- added explicit dbh disconnect to MultiTestDB destructor · 1ce9e375
  Graham McVicker authored Nov 15, 2002
  
  1ce9e375
- verbose off, shouldnt have been committed · 8671e52b
  Arne Stabenau authored Nov 15, 2002
  
  8671e52b
- tutorial.pl · 2631aa6b
  Graham McVicker authored Nov 15, 2002
  
  2631aa6b
14 Nov, 2002 6 commits
- exon.t is Multi, now adding more tests · 85db588c
  Arne Stabenau authored Nov 14, 2002
  
  85db588c
- Updated version with "missing" column from some table or other... · d8fd7b57
  Alistair Rust authored Nov 14, 2002
  
  d8fd7b57
- Updated tests. · 7822a431
  Alistair Rust authored Nov 14, 2002
  
  7822a431
- Needs a bit of a workover this module ... · dcf62a15
  Arne Stabenau authored Nov 14, 2002
  
  dcf62a15
- *** empty log message *** · ad26ca66
  Arne Stabenau authored Nov 14, 2002
  
  ad26ca66
- analysis has 9 tests not 8 · b484ba4f
  Graham McVicker authored Nov 14, 2002
  
  b484ba4f