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  1. 06 Sep, 2013 1 commit
    • cvs2git's avatar
      This commit was manufactured by cvs2svn to create tag 'tag- · ab9f2f08
      cvs2git authored
      ensemblgenomes-20-73'.
      
      Sprout from master 2013-08-22 09:32:14 UTC Magali Ruffier <mr6@sanger.ac.uk> 'added fetch_stable_id_event and get_event methods for archivestableid, in adaptor and object modules respectively'
      Cherrypick from master 2013-09-06 15:16:53 UTC Alessandro Vullo <avullo@ebi.ac.uk> 'Tests for subroutines in the Bio::EnsEMBL::Utils::IO module.':
          modules/t/io.t
          modules/t/test-genome-DBs/ontology/ontology/table.sql
          sql/patch_73_74_a.sql
          sql/patch_73_74_b.sql
          sql/patch_73_74_c.sql
          sql/patch_73_74_d.sql
          sql/patch_73_74_e.sql
          sql/patch_73_74_f.sql
      Cherrypick from branch-ensembl-73 2013-08-30 09:06:03 UTC Magali Ruffier <mr6@sanger.ac.uk> 'revert changes for metacontainer support':
          misc-scripts/ontology/sql/patch_72_73_b.sql
          misc-scripts/ontology/sql/tables.sql
          modules/Bio/EnsEMBL/DBSQL/AssemblyAdaptor.pm
          modules/Bio/EnsEMBL/DBSQL/OntologyDBAdaptor.pm
          modules/Bio/EnsEMBL/DBSQL/SliceAdaptor.pm
          modules/Bio/EnsEMBL/RepeatFeature.pm
          modules/Bio/EnsEMBL/Slice.pm
          modules/Bio/EnsEMBL/Utils/ConfigRegistry.pm
      ab9f2f08
  2. 22 Aug, 2013 1 commit
  3. 16 Aug, 2013 1 commit
  4. 12 Aug, 2013 5 commits
  5. 09 Aug, 2013 1 commit
  6. 08 Aug, 2013 1 commit
    • Magali Ruffier's avatar
      wrong error message · 2fd7b96e
      Magali Ruffier authored
      if your meta_coord table is wrong, you should run update_meta_coord.pl, not meta_levels.pl
      2fd7b96e
  7. 07 Aug, 2013 4 commits
  8. 06 Aug, 2013 1 commit
    • Andy Yates's avatar
      [ENSCORESW-564]. Added integer checks. · ff358031
      Andy Yates authored
      The code previously allowed bogus numbers through into the final slice which
      caused errors in later methods. The website crashed because of this. We will
      reject anything that was not an integer if the start or end was defined.
      ff358031
  9. 31 Jul, 2013 1 commit
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  26. 21 May, 2013 1 commit