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Changed attribute code length to 14 characters.

Add support for stop codon readthrough as a type of edit. 

Code updated to implement review comments. There is a new package to handle stop codon readthrough in a sequence. Test case has been updated with new regex

The previous test-database update missed some patches for the core and
variation schemas, which is why Travis jobs keep failing these days.

ENSCORESW-3110- Code to handle stop codon readthrough in 12 transcripts. The code edits the amino acid sequence to display the stop codon readthrough with an X

[ENSCORESW-3077] Travis: Unify configuration of Slack notifications

add feature_so_term to Slice.pm, as was added to Feature.pm

Patch test databases for release 97, part 2 [master]

Code updated to implement review comments. There is a new package to handle stop codon readthrough in a sequence. Test case has been updated with new regex

Merge remote-tracking branch 'origin/bugfix/e97_testdb_patches_master' into feature/stop_codon_readthrough_edit
This merge will update the schema to version 97 for feature/stop_codon_readthrough_edit

The previous test-database update missed some patches for the core and
variation schemas, which is why Travis jobs keep failing these days.

ENSCORESW-3110- Code to handle stop codon readthrough in 12 transcripts. The code edits the amino acid sequence to display the stop codon readthrough with an X

Add support for mature RNA products of transcripts (e.g. MicroRNA) to the API and schema

See ENSCORESW-3054. Only really affects the test suite at this point,
in the code proper the prefix only appears in docstrings.

Apply patch_96_97_{c,d,e}, insert the necessary data into
homo_sapiens/core.

Three separate patches here:

1. Create Create tables for RNAProduct. Basically renamed copies of
Translation tables "translation" and "translation_attrib" plus a
new column rnaproduct_type_id, complete with a corresponding table
rnaproduct_type, which is used to distinguish between RNA-product
types;

2. Add type RNAProduct to object_xref.ensembl_object_type. This is
needed to support e.g. miRBase xrefs for microRNAs;

3. Add type rnaproduct to stable_id_event.type. This is needed to
support mature RNA products in stable-id mapping.