This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git.
Pull mirroring updated .
- 04 Mar, 2011 1 commit
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Steve Trevanion authored
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- 01 Mar, 2011 4 commits
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Maurice Hendrix authored
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Maurice Hendrix authored
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Maurice Hendrix authored
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Maurice Hendrix authored
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- 14 Feb, 2011 1 commit
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Susan Fairley authored
Modified to deal with alt_scaffold_placement.txt ori=b, to process the files from GRC (skipping previously loaded patches) and load the patches into the supercontig level of the assembly (as well as chromosome and contig) along with the chrom-supercontig and supercontig-chrom mappings.
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- 10 Feb, 2011 1 commit
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Maurice Hendrix authored
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- 07 Feb, 2011 1 commit
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Andreas Kusalananda Kähäri authored
Clean up comment code that had unbalanced quotes and parens (causing Pdoc to break).
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- 04 Feb, 2011 1 commit
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Web Group authored
sb23: fixed get_species_and_object_type - check port as well as host. Also, don't die. Die is bad. Why would you die when you can return undef and not totally break the web code?
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- 18 Jan, 2011 5 commits
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cvs2git authored
ensembl-61'. Sprout from master 2011-01-18 13:58:26 UTC Andreas Kusalananda Kähäri <ak4@sanger.ac.uk> 'Generate code to remove master table entries marked with is_current = 0.' Delete: misc-scripts/protein_match/process_pmach.pl
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Glenn Proctor authored
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- 14 Jan, 2011 3 commits
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Karyn Megy authored
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Karyn Megy authored
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Karyn Megy authored
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- 13 Jan, 2011 5 commits
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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- 12 Jan, 2011 1 commit
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Andreas Kusalananda Kähäri authored
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- 11 Jan, 2011 5 commits
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Graham Ritchie authored
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Graham Ritchie authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Graham Ritchie authored
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- 10 Jan, 2011 1 commit
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Ian Longden authored
Added ensembl_object_type and ensembl_id methods so that IF the dbentry is connected to a specific Ensembl entity (Gene/Transcript/Translation) then we can easily find out which one it is
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- 07 Jan, 2011 1 commit
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Karyn Megy authored
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- 06 Jan, 2011 4 commits
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Andreas Kusalananda Kähäri authored
Asking for a a GOTerm adaptor, or a SOTerm adaptor, still works, but the correct call to get_adaptor() should request an OntologyTerm adaptor.
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Andreas Kusalananda Kähäri authored
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Eugene Kulesha authored
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Andreas Kusalananda Kähäri authored
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- 05 Jan, 2011 6 commits
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Andreas Kusalananda Kähäri authored
the array objects instead of dereferencing using integer indexes from for-loops, and use [-1] instead of [$#$ea].
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
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Andreas Kusalananda Kähäri authored
the form "host:port", with ":port" being optional (default is 3306).
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