Commits · f7fd65bd8c9b2510b30e5b83710e63c675a1d62f · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Jan 29, 2023.

22 Feb, 2001 1 commit
- Adaptor and object for representing Karyotype Bands. Replaces KaryotypeAdaptor module · f7fd65bd
  Web Admin authored Feb 22, 2001
  
  f7fd65bd
21 Feb, 2001 1 commit
- cleaned up tests; (all pass) - issues with the way supporting features now work · 65f81660
  Ewan Birney authored Feb 21, 2001
  
  65f81660
19 Feb, 2001 8 commits
- bug fix · 8297ad7d
  Ensembl Pipeline authored Feb 19, 2001
  
  8297ad7d
- SQL error fixed in fetch_VirtualContig_of_clone · 588ea7e6
  Web Admin authored Feb 19, 2001
  
  588ea7e6
- *** empty log message *** · ce680dd0
  Ensembl Pipeline authored Feb 19, 2001
  
  ce680dd0
- Added in get_all...above_pid · 9d3ef1ab
  Ensembl Pipeline authored Feb 19, 2001
  
  9d3ef1ab
- fixes for dumps · 1c336083
  Arek Icrapzych authored Feb 19, 2001
  
  1c336083
- updated script · 65c1a97f
  Arek Icrapzych authored Feb 19, 2001
  
  65c1a97f
- changed $self to $annseq to make the module compile (date still in the wrong format) · d600cb08
  Arek Icrapzych authored Feb 19, 2001
  
  d600cb08
- hopefully sorted out the FECKING DATE FORMAT for these stupid flat file dumps · 65ad3cdb
  Ewan Birney authored Feb 19, 2001
  
  65ad3cdb
17 Feb, 2001 1 commit
- fixed flat file dumping for both stickies and translation convention · f2b2668d
  Ewan Birney authored Feb 17, 2001
  
  f2b2668d
16 Feb, 2001 1 commit
- $db->host not getting set - fixed · e0a492d5
  Ensembl Pipeline authored Feb 16, 2001
  
  e0a492d5
15 Feb, 2001 2 commits
- SQL problem fixed · a0d3c3e9
  Web Admin authored Feb 15, 2001
  
  a0d3c3e9
- Fixed another idlist bug waiting to happen. Removed NO IDS stderr print · 46bd8a8d
  Web Admin authored Feb 15, 2001
  
  46bd8a8d
14 Feb, 2001 21 commits
- Added in genscan evidence · a2d52e44
  Michele Clamp authored Feb 14, 2001
  
  a2d52e44
- Hopefully really removed genscans · b8baba91
  Michele Clamp authored Feb 14, 2001
  
  b8baba91
- Removed genscan from supporting evidence · ace9ac39
  Michele Clamp authored Feb 14, 2001
  
  ace9ac39
- Muppet bug · a772b1a5
  Michele Clamp authored Feb 14, 2001
  
  a772b1a5
- cheeky transcript description hook put in · 1e221c23
  Ewan Birney authored Feb 14, 2001
  
  1e221c23
- possible speed up for supporting features · a6100d5a
  Michele Clamp authored Feb 14, 2001
  
  a6100d5a
- added eprof profiling into static vc build to track down bottleneck · 28e9004c
  Ewan Birney authored Feb 14, 2001
  
  28e9004c
- bugger · fb7aa607
  Michele Clamp authored Feb 14, 2001
  
  fb7aa607
- bug in get supportin evidence · c66c4200
  Michele Clamp authored Feb 14, 2001
  
  c66c4200
- Added supporting feature call · 83c3b14b
  Michele Clamp authored Feb 14, 2001
  
  83c3b14b
- added method dna_length · 6aaf766f
  Philip Lijnzaad authored Feb 14, 2001
  
  6aaf766f
- Denormalized the contig->landmark markers into a new table to · d4a1be8e
  Michele Clamp authored Feb 14, 2001
```
speed up the get_landmark_MarkerFeatures call
```
  d4a1be8e
- Fixed StaticContig problem when it fell over if idlist was empty · 61c9e02f
  Web Admin authored Feb 14, 2001
  
  61c9e02f
- Removed irritating STDERR message · 0f4cf654
  Web Admin authored Feb 14, 2001
  
  0f4cf654
- StaticContig bugs in repeat features and get_all_RawContigs · 5dc72893
  Michele Clamp authored Feb 14, 2001
  
  5dc72893
- removed unnecessary join from sql in landmark marker calls · 22ac8e40
  Arek Icrapzych authored Feb 14, 2001
  
  22ac8e40
- Merge conflicts resolved · 9926a40b
  Web Admin authored Feb 14, 2001
  
  9926a40b
- Fixed missing dbobj · 0587fd51
  Web Admin authored Feb 14, 2001
  
  0587fd51
- Made feature id = hid for StaticContig so Arek's code works · f4c83bb4
  Michele Clamp authored Feb 14, 2001
  
  f4c83bb4
- go-faster (I hope) in list syntax for StaticContig joins - notice does not... · b35caa62
  Ewan Birney authored Feb 14, 2001
```
go-faster (I hope) in list syntax for StaticContig joins - notice does not prevent a join to static_golden_path but stops a range-scan of the index
```
  b35caa62
- added karyotype table. Apologies · c43f6fc1
  Ewan Birney authored Feb 14, 2001
  
  c43f6fc1
13 Feb, 2001 5 commits
- reinstated each_DBLink, was accidentally removed *blush** · 2ee6a87c
  Philip Lijnzaad authored Feb 13, 2001
  
  2ee6a87c
- POSIX timing instead of perl times() · a549b98d
  Web Admin authored Feb 13, 2001
  
  a549b98d
- added table gene_description · d216e494
  Philip Lijnzaad authored Feb 13, 2001
  
  d216e494
- added testing of gene->description. BTW, each_DBLink is completely unimplemented !? · 4c5d5d3d
  Philip Lijnzaad authored Feb 13, 2001
  
  4c5d5d3d
- forgot to execute ... · ffde0fca
  Philip Lijnzaad authored Feb 13, 2001
  
  ffde0fca